RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ORAI1Q96D31 301 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 LAT2Q9GZY6 243 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 C8orf33Q9H7E9 229 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 C20orf141Q9NUB4 165 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 GNG13Q9P2W3 67 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 GPR160Q9UJ42 338 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PQLC2LA1A4F0 135 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 GPR31O00270 319 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CRYBA1P05813 215 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 BCKDHBP21953 392 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 RBP2P50120 134 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 KIRREL2Q6UWL6 708 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF429Q86V71 674 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF761Q86XN6 746 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 KLHDC1Q8N7A1 406 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 OR5T1Q8NG75 326 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TINAGL1Q9GZM7 467 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ST6GALNAC2Q9UJ37 374 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PIGLQ9Y2B2 252 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MMACHCQ9Y4U1 282 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CCDC187A0A096LP49 1063 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CDKN3Q16667 212 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PRTGQ2VWP7 1150 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MKXQ8IYA7 352 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 BAHD1Q8TBE0 780 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 FAM3CQ92520 227 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 HCSTQ9UBK5 93 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 EIF1BO60739 113 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 EIF1P41567 113 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ECH1Q13011 328 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ISXQ2M1V0 245 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 Q5BKY6 102 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SHEQ5VZ18 495 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SEMA6DQ8NFY4 1073 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PIGCQ92535 297 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 UHRF2Q96PU4 802 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PLK3Q9H4B4 646 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PATZ1Q9HBE1 687 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 FBXO4Q9UKT5 387 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 GAB2Q9UQC2 676 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TMED3Q9Y3Q3 217 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SCN3AQ9NY46 2000 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 FGF17O60258 216 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ERVK-16P61578 105 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 HSF1Q00613 529 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 BAXQ07812 192 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PDLIM3Q53GG5 364 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CST9LP1Q5W188 147 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 CLEC9AQ6UXN8 241 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 DBX2Q6ZNG2 339 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MARCH3Q86UD3 253 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 EIF4E3Q8N5X7 224 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SLC38A9Q8NBW4 561 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZG16BQ96DA0 208 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ALG14Q96F25 216 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF75AQ96N20 296 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TP53TG5Q9Y2B4 290 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 KIR2DS1A0A191URI9 304 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF727A8MUV8 499 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TUSC2O75896 110 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SFT2D2O95562 160 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 RAB4AP20338 218 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 KIR2DS4P43632 304 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 KIR2DS1Q14954 304 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ELAVL1Q15717 326 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ACKR1Q16570 336 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 HAGHQ16775 308 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ULBP2Q9BZM5 246 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 BANF2Q9H503 90 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 NXT1Q9UKK6 140 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 LRP12Q9Y561 859 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 FAM53BQ14153 422 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 LAIR1Q6GTX8 287 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 OR52W1Q6IF63 320 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 LRRTM1Q86UE6 522 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 BAGE2Q86Y30 109 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SUMF1Q8NBK3 374 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ASH2LQ9UBL3 628 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SRPK3Q9UPE1 567 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SEC14L6B5MCN3 397 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 M0QZK8 103 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SSSCA1O60232 199 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 GGCTO75223 188 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 NKX2-2O95096 273 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 SLC16A13Q7RTY0 426 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MMP25Q9NPA2 562 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 IL23AQ9NPF7 189 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 MBNL1Q9NR56 388 aaKnown RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PTP4A3O75365 173 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TIMP1P01033 207 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 IGF2P01344 180 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TM4SF4P48230 202 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 TESK1Q15569 626 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 ACOT6Q3I5F7 207 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-203ENST00000343508 PHLDA2Q53GA4 152 aa4.32□□□□□ -1.72
CSMD3-203ENST00000343508 NCR3LG1Q68D85 454 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms