RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SPDEFO95238 335 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 IL2RAP01589 272 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 MGMTP16455 207 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 TBPP20226 339 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 ZNF345Q14585 488 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 INPP5JQ15735 1006 aaPredicted RBP12.9□□□□□ -0.34
TDP2-201ENST00000341060 OR52W1Q6IF63 320 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 LYG2Q86SG7 212 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 DTWD2Q8NBA8 298 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 OR10R2Q8NGX6 335 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 OR6X1Q8NH79 312 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 OR1S1Q8NH92 325 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 ZBTB8AQ96BR9 441 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 LINC00052Q96N35 136 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 CRB3Q9BUF7 120 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 GPN3Q9UHW5 284 aaPredicted RBP12.9□□□□□ -0.34
TDP2-201ENST00000341060 FBXL2Q9UKC9 423 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 CFAP54Q96N23 3096 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.35
TDP2-201ENST00000341060 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 A8MXK9 166 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 STK17BO94768 372 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 GNB3P16520 340 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 ZNF20P17024 532 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 HLA-GP17693 338 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 HRH1P35367 487 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 GABREP78334 506 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 MFAP5Q13361 173 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 SLC22A6Q4U2R8 563 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 FAHD2BQ6P2I3 314 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 SLC25A47Q6Q0C1 308 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 ANGPTL5Q86XS5 388 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 GALNT11Q8NCW6 608 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 CLDN23Q96B33 292 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 SPACA9Q96E40 222 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 FAHD2AQ96GK7 314 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 OR5B2Q96R09 309 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 DUSP23Q9BVJ7 150 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 CST11Q9H112 138 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 SLC26A1Q9H2B4 701 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 IFT46Q9NQC8 304 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 WDFY3Q8IZQ1 3526 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 LY6G6EA0A0G2JKS1 128 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 IGHV5-10-1A0A0J9YXX1 117 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 K7ESF4 209 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 DKK1O94907 266 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 OPN1LWP04000 364 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 RLN2P04090 185 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 UBBP0CG47 229 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 EPHA8P29322 1005 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 CDAP32320 146 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 CD96P40200 585 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 CASRP41180 1078 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 FOXK1P85037 733 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 PPP1R1AQ13522 171 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 ZNF239Q16600 458 aaKnown RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 HIST3H3Q16695 136 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 C11orf87Q6NUJ2 197 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 OR2W3Q7Z3T1 314 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 ABHD12BQ7Z5M8 362 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 PDZD9Q8IXQ8 264 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 OR8B12Q8NGG6 310 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 MITD1Q8WV92 249 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 OXGR1Q96P68 337 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 RASL10BQ96S79 203 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 PPA2Q9H2U2 334 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 ASH2LQ9UBL3 628 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 C19orf25Q9UFG5 118 aaPredicted RBP12.89□□□□□ -0.35
TDP2-201ENST00000341060 KCNK7Q9Y2U2 307 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 U3KQA8 63 aa12.89□□□□□ -0.35
TDP2-201ENST00000341060 LOC100509620A0A075B734 347 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 KRBOX1C9JBD0 128 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 FGF2P09038 288 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 LIPCP11150 499 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 SLC25A4P12235 298 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ABOP16442 354 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ZNF121P58317 390 aaPredicted RBP12.88□□□□□ -0.35
TDP2-201ENST00000341060 IL13RA1P78552 427 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 CCL7P80098 99 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 HSD17B13Q7Z5P4 300 aaPredicted RBP12.88□□□□□ -0.35
TDP2-201ENST00000341060 OR5AS1Q8N127 324 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 NICN1Q9BSH3 213 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 PDCD10Q9BUL8 212 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
TDP2-201ENST00000341060 COMMD9Q9P000 198 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 C9orf170A2RU37 121 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 SMAD9O15198 467 aaKnown RBP12.88□□□□□ -0.35
TDP2-201ENST00000341060 SSX5O60225 188 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 OR2F2O95006 317 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms