RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DEAF1O75398 565 aaPredicted RBP11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 APOC1P02654 83 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 SPARCP09486 303 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 OSMP13725 252 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 GATA3P23771 443 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 SLC6A9P48067 706 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 GRB2P62993 217 aaKnown RBP11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 GK2Q14410 553 aaPredicted RBP11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 ZNF181Q2M3W8 571 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 SHQ1Q6PI26 577 aaKnown RBP11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 PGAP1Q75T13 922 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 CXXC5Q7LFL8 322 aaKnown RBP11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 DCXRQ7Z4W1 244 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 CELF2-AS1Q8N7Q2 184 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 OR51L1Q8NGJ5 315 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 COPS4Q9BT78 406 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 SP140LQ9H930 580 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 WDR76Q9H967 626 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 A0A0X1KG70 313 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ISPDA4D126 451 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 LRRC30A6NM36 301 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 J3QLI3 93 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 PRODHO43272 600 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 GLCEO94923 617 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 FSTL3O95633 263 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 IGHV2-70P01814 119 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 GYPBP06028 91 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 POU1F1P28069 291 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 SRP14P37108 136 aaKnown RBP11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ERFP50548 548 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 BTG1P62324 171 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 TAF13Q15543 124 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 OXLD1Q5BKU9 147 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 LINC01590Q5TEZ4 76 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 SHFQ7M4L6 423 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 MRPL21Q7Z2W9 205 aaKnown RBP11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 TMEM179BQ7Z7N9 219 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 OR5AS1Q8N127 324 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 MUC20Q8N307 709 aaPredicted RBP11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 KLHL36Q8N4N3 616 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 OR4M2Q8NGB6 313 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 OR10S1Q8NGN2 331 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ST7LQ8TDW4 575 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ITLN1Q8WWA0 313 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ZNRF4Q8WWF5 429 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 ERGIC1Q969X5 290 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 SLAMF6Q96DU3 332 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 MEGF10Q96KG7 1140 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 INTS14Q96SY0 518 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 KCNJ15Q99712 375 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 MDFIQ99750 246 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 MARCH7Q9H992 704 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 GCM1Q9NP62 436 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 COL6A5A8TX70 2615 aa11.26□□□□□ -0.61
SIRPB3P-201ENST00000340424 PPIAL4EA0A075B759 164 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PPIAL4CA0A0B4J2A2 164 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PRR23D1E9PI22 279 aaPredicted RBP11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PPIAL4DF5H284 164 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 XRCC2O43543 280 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PNPP00491 289 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PRR23D2P0DMB1 279 aaPredicted RBP11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PPIAL4FP0DN26 164 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 GSTT1P30711 240 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 GATA4P43694 442 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 RAD23AP54725 363 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 CDK5Q00535 292 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 DBPQ10586 325 aaPredicted RBP11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 GINS1Q14691 196 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 IL17RELQ6ZVW7 336 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 KLBQ86Z14 1044 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 C1orf87Q8N0U7 546 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PARP8Q8N3A8 854 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 RFLNBQ8N5W9 214 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 BHLHE23Q8NDY6 225 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 SPRYD4Q8WW59 207 aaPredicted RBP11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PLEKHA8Q96JA3 519 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 SIGLEC11Q96RL6 698 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PRRG3Q9BZD7 231 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 LPAR2Q9HBW0 351 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 KIF17Q9P2E2 1029 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 PCDHB10Q9UN67 800 aa11.25□□□□□ -0.61
SIRPB3P-201ENST00000340424 TMEM178BH3BS89 294 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 PLPP2O43688 288 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 GMDSO60547 372 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 FOXH1O75593 365 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 AVPP01185 164 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 CLUP10909 449 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 CFL1P23528 166 aaKnown RBP11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 CD200P41217 278 aa11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 RPS27P42677 84 aaKnown RBP11.24□□□□□ -0.61
SIRPB3P-201ENST00000340424 MZT1Q08AG7 82 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms