RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 NOX4Q9NPH5 578 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ZNF71Q9NQZ8 489 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 CYSLTR2Q9NS75 346 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PLEKHA6Q9Y2H5 1048 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 IFITM5A6NNB3 132 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SULT1C2O00338 296 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PIN1P1O15428 100 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SYT7O43581 403 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PNPP00491 289 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 GLI4P10075 376 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 GNALP38405 381 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 MZT1Q08AG7 82 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PPA1Q15181 289 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 GSG1Q2KHT4 349 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 TBC1D28Q2M2D7 210 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 TBRG1Q3YBR2 411 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FBXW12Q6X9E4 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 DNM1P46Q6ZS02 220 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FTMTQ8N4E7 242 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 OR13C3Q8NGS6 347 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SORCS2Q96PQ0 1159 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 BARHL1Q9BZE3 327 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 CHST5Q9GZS9 411 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PLEK2Q9NYT0 353 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PHF3Q92576 2039 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 PKD1L2Q7Z442 2459 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 OPN1LWP04000 364 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 ABOP16442 354 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 ZNF14P17017 642 aaPredicted RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 CALRP27797 417 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 RFC3P40938 356 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SORDQ00796 357 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 MALLQ13021 153 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 RSPO1Q2MKA7 263 aaPredicted RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM209AQ5JX71 171 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 TSEN15Q8WW01 171 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 SLC30A2Q9BRI3 323 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PLEKHA1Q9HB21 404 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 TMEM138Q9NPI0 162 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SLC5A6Q9Y289 635 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 GRIP1Q9Y3R0 1128 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 NCOR2Q9Y618 2525 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A18PA6NE21 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A16PA6NEW6 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A20PA6NIJ5 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A8PA6NJQ4 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A7PA6NKC0 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A22PA8MWA6 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A12PA8MX19 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A5PA8MXJ8 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A23PA8MXZ1 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A15PP0C7V4 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A13PP0C7W8 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A14PP0C7W9 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FAM90A24PP0C7X0 464 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SPINK2P20155 84 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 RAB3AP20336 220 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 IGHV1-2P23083 117 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 BDKRB2P30411 391 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 APLNRP35414 380 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PSMB10P40306 273 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 CA7P43166 264 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 HNRNPA0Q13151 305 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 GPR176Q14439 515 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SPANXN2Q5MJ10 180 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 SEM1Q6ZVN7 128 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 OR1M1Q8NGA1 313 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 HSD17B8Q92506 261 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.25□□□□□ -1.41
NUP43-201ENST00000340413 hCG_38984A0A1B0GV85 526 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 LDLRAD4O15165 306 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 ZNF20P17024 532 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 ATF1P18846 271 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 TCEA1P23193 301 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 HOXC12P31275 282 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 CDAP32320 146 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 EVX1P49640 407 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 UBE2NP61088 152 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 RIPPLY1Q0D2K3 151 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 RAB12Q6IQ22 244 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 PYHIN1Q6K0P9 492 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 LHFPL2Q6ZUX7 228 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 BHLHA15Q7RTS1 189 aaPredicted RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 Q8NFD4 153 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 MRPS24Q96EL2 167 aaKnown RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 ALKBH3Q96Q83 286 aaPredicted RBP6.25□□□□□ -1.41
NUP43-201ENST00000340413 OR14A2Q96R54 314 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 RHBDD3Q9Y3P4 386 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 MPC1Q9Y5U8 109 aa6.25□□□□□ -1.41
NUP43-201ENST00000340413 FASNP49327 2511 aaKnown RBP6.24□□□□□ -1.41
NUP43-201ENST00000340413 CEP250Q9BV73 2442 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 RER1O15258 196 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 AKR7A2O43488 359 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 HTR5AP47898 357 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 PABPC1L2AQ5JQF8 200 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 GFRALQ6UXV0 394 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 LINC00596Q86U02 117 aa6.24□□□□□ -1.41
NUP43-201ENST00000340413 EXTL1Q92935 676 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms