RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ABLIM2Q6H8Q1 611 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 SKA3Q8IX90 412 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 PAQR4Q8N4S7 273 aaPredicted RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 GJC3Q8NFK1 279 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 MARVELD1Q9BSK0 173 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 SF3B5Q9BWJ5 86 aaKnown RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 RANGRFQ9HD47 186 aaPredicted RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC7A10Q9NS82 523 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 CKLFQ9UBR5 152 aa6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 MRPS18CQ9Y3D5 142 aaKnown RBP6.49□□□□□ -1.37
SRFBP1-201ENST00000339397 TNRC6AQ8NDV7 1962 aaKnown RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF503-AS2A6NEH8 195 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 NME2P1O60361 137 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 TGM6O95932 706 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 CCL2P13500 99 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF708P17019 499 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF32P17041 273 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 SPINK2P20155 84 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 NME2P22392 152 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF133P52736 654 aaPredicted RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 CD83Q01151 205 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 SNTB2Q13425 540 aaKnown RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 TBRG1Q3YBR2 411 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF766Q5HY98 468 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 HDDC2Q7Z4H3 204 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 OR5D18Q8NGL1 313 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 DVL3Q92997 716 aaPredicted RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ATG5Q9H1Y0 275 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM38BQ9NVV0 291 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ABI3Q9P2A4 366 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 SPRR3Q9UBC9 169 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 MED12LQ86YW9 2145 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 LOC100289279A0A1B0GTE1 492 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 GGT3PA6NGU5 568 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 INMT-MINDY4F8WBC2 141 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 SMLR1H3BR10 107 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 XRCC3O43542 346 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 UNC119Q13432 240 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ELFN2Q5R3F8 820 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ATAD3CQ5T2N8 411 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM27BQ5VT28 67 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF544Q6NX49 715 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ANKRD16Q6P6B7 361 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 CRIP3Q6Q6R5 217 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ASCL5Q7RTU5 278 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 C1QL2Q7Z5L3 287 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 GPR137CQ8N3F9 429 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ACBD4Q8NC06 268 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 CPNE4Q96A23 557 aaPredicted RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 ZC3HAV1LQ96H79 300 aaKnown RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 CACNG6Q9BXT2 260 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 GPR35Q9HC97 309 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 NOSIPQ9Y314 301 aaKnown RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 RBMX2Q9Y388 322 aaKnown RBP6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 BOLA1Q9Y3E2 137 aa6.48□□□□□ -1.37
SRFBP1-201ENST00000339397 A0A0A6YYJ9 748 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 A0A1B0GVI7 797 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 M0R135 149 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TCRBP04435 133 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ALDOBP05062 364 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 FAHP16930 419 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 FSTP19883 344 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ACKR3P25106 362 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 MRPS34P82930 218 aaKnown RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 PITPNAQ00169 270 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 PSG4Q00888 419 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC10A1Q14973 349 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 DEFB109BQ30KR1 87 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 GLT8D1Q68CQ7 371 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 FOXL2NBQ6ZUU3 175 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF627Q7L945 461 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 NUFIP2Q7Z417 695 aaKnown RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ANGPTL5Q86XS5 388 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OR5AS1Q8N127 324 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC22A24Q8N4F4 322 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM104Q8NE00 496 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 CPEB3Q8NE35 698 aaKnown RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OR1M1Q8NGA1 313 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 RAB40AQ8WXH6 277 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 HAS2Q92819 552 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF799Q96GE5 643 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 PGAM5Q96HS1 289 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 FOXB1Q99853 325 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 B3GNT4Q9C0J1 378 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TP63Q9H3D4 680 aaPredicted RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 HRASLSQ9HDD0 168 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF224Q9NZL3 707 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 KLRC4-KLRK1H3BQV0 150 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 GABARAPH6UMI1 98 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SGCEO43556 437 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 GSTZ1O43708 216 aaPredicted RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SYNGR3O43761 229 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 LRP3O75074 770 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 MRPL33O75394 65 aaKnown RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 CD37P11049 281 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 BDKRB2P30411 391 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OR3A4PP47883 348 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TNFSF10P50591 281 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF84P51523 738 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms