RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 HDGFL3Q9Y3E1 203 aa11.32□□□□□ -0.6
DFFB-202ENST00000339350 EML5Q05BV3 1969 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 TEX13DA0A0J9YY54 714 aaPredicted RBP11.31□□□□□ -0.6
DFFB-202ENST00000339350 OGG1O15527 345 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 GMFGO60234 142 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 TRGC2P03986 189 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 CPMP14384 443 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 RAB6AP20340 208 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 GABRA3P34903 492 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 DVL1P1P54792 670 aaPredicted RBP11.31□□□□□ -0.6
DFFB-202ENST00000339350 GPM6BQ13491 265 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 OR5I1Q13606 314 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 GAB4Q2WGN9 574 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 TMEM69Q5SWH9 247 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 LEMD1Q68G75 181 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 FAHD2BQ6P2I3 314 aaPredicted RBP11.31□□□□□ -0.6
DFFB-202ENST00000339350 BTNL3Q6UXE8 466 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 GCNT2Q8N0V5 402 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 FAHD2AQ96GK7 314 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 URM1Q9BTM9 101 aaKnown RBP11.31□□□□□ -0.6
DFFB-202ENST00000339350 PLA2G2FQ9BZM2 168 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 LMAN1LQ9HAT1 526 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 URGCP-MRPS24S4R325 110 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 A0A087WUJ7 227 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 LINC01565O15544 149 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 RCBTB2O95199 551 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 CT62P0C5K7 136 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 CMPK1P30085 196 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 SOX2P48431 317 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ACTBP60709 375 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ACTA2P62736 377 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ACTG1P63261 375 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ACTG2P63267 376 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ACTC1P68032 377 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ACTA1P68133 377 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 ARHGAP11BQ3KRB8 267 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 AMZ1Q400G9 498 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 AGBL4Q5VU57 503 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
DFFB-202ENST00000339350 ENPP7Q6UWV6 458 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 OR4N2Q8NGD1 307 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 TERB2Q8NHR7 220 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
DFFB-202ENST00000339350 MEIS3P1A6NDR6 274 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 XRCC3O43542 346 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OPN1MWP04001 364 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 CEACAM5P06731 702 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 CXCL1P09341 107 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 PVRP15151 417 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 HTR2CP28335 458 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 EMDP50402 254 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 NKPD1Q17RQ9 610 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 C2orf27AQ580R0 203 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 VWA2Q5GFL6 755 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OR5M8Q8NGP6 311 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OR1J1Q8NGS3 322 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 M1APQ8TC57 530 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 NMNAT3Q96T66 252 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 FLRT3Q9NZU0 649 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 PADI1Q9ULC6 663 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 FLVCR1Q9Y5Y0 555 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 A0A1B0GTH9 108 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 LYPD3O95274 346 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 CSTAP01040 98 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OR8U9P0C7N5 309 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 RPS27P42677 84 aaKnown RBP11.3□□□□□ -0.6
DFFB-202ENST00000339350 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
DFFB-202ENST00000339350 DUSP8Q13202 625 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 HERPUD1Q15011 391 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 LRP11Q86VZ4 500 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 OR8U1Q8NH10 309 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 YPEL4Q96NS1 127 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 GFI1Q99684 422 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 ZNF2Q9BSG1 426 aaPredicted RBP11.3□□□□□ -0.6
DFFB-202ENST00000339350 METTL8Q9H825 291 aaKnown RBP11.3□□□□□ -0.6
DFFB-202ENST00000339350 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 A0A1W2PN81 502 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 FAM221AA4D161 298 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 F8VVB4 439 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 F8VWA3 439 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 FGF17O60258 216 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 CTSVO60911 334 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 LIPCP11150 499 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 SLC2A5P22732 501 aa11.3□□□□□ -0.6
DFFB-202ENST00000339350 CHRNA7P36544 502 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms