RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RUSC1-AS1Q66K80 236 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 ZNF841Q6ZN19 808 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 DPY19L2P2Q6ZN68 376 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 COLCA1Q6ZS62 124 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 C19orf18Q8NEA5 215 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 FAM71F1Q96KD3 344 aaPredicted RBP12.99□□□□□ -0.33
LINC01116-202ENST00000339037 CITED1Q99966 193 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 TMCC3Q9ULS5 477 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 AURKCQ9UQB9 309 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 POMT1Q9Y6A1 747 aa12.99□□□□□ -0.33
LINC01116-202ENST00000339037 CLPSL1A2RUU4 121 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 F5H5K5 113 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 DCTN6O00399 190 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 ATP8B1O43520 1251 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 FAM20BO75063 409 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 TXNDC12O95881 172 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 SFTPBP07988 381 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 MELTFP08582 738 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 MSX2P35548 267 aaPredicted RBP12.98□□□□□ -0.33
LINC01116-202ENST00000339037 CFHR2P36980 270 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 CDKN2AP42771 156 aaKnown RBP12.98□□□□□ -0.33
LINC01116-202ENST00000339037 RPS6KA3P51812 740 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 DBPQ10586 325 aaPredicted RBP12.98□□□□□ -0.33
LINC01116-202ENST00000339037 MALLQ13021 153 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 PDCD1Q15116 288 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 KCNJ8Q15842 424 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 RSPO1Q2MKA7 263 aaPredicted RBP12.98□□□□□ -0.33
LINC01116-202ENST00000339037 CLEC12AQ5QGZ9 265 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 PRAMEF6Q5VXH4 476 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 CD276Q5ZPR3 534 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 SSMEM1Q8WWF3 244 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 GATAD2BQ8WXI9 593 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 PITX2Q99697 317 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 NSRP1Q9H0G5 558 aaKnown RBP12.98□□□□□ -0.33
LINC01116-202ENST00000339037 MMP27Q9H306 513 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 GORASP2Q9H8Y8 452 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
LINC01116-202ENST00000339037 IGLV1-36A0A0B4J1U3 117 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 ZNF879B4DU55 563 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 P2RY10O00398 339 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 GMNNO75496 209 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 TOX4O94842 621 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 PPP1R3DO95685 299 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 LIPFP07098 398 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 ACSM4P0C7M7 580 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 HSD17B1P14061 328 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 CD200P41217 278 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 RAD23AP54725 363 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
LINC01116-202ENST00000339037 SPIBQ01892 262 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 ECH1Q13011 328 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 MPPED2Q15777 294 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 SMARCD3Q6STE5 483 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 ZNF620Q6ZNG0 422 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 CFAP77Q6ZQR2 320 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 PGAP1Q75T13 922 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 CPLX4Q7Z7G2 160 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 SLC26A10Q8NG04 563 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 FANK1Q8TC84 345 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 SPRYD4Q8WW59 207 aaPredicted RBP12.97□□□□□ -0.33
LINC01116-202ENST00000339037 PYURFQ96I23 114 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 ATF6BQ99941 703 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 FN3KRPQ9HA64 309 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 KRCC1Q9NPI7 259 aaPredicted RBP12.97□□□□□ -0.33
LINC01116-202ENST00000339037 ERVK-18Q9QC07 812 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 MAGEL2Q9UJ55 1249 aa12.97□□□□□ -0.33
LINC01116-202ENST00000339037 NOP16Q9Y3C1 178 aaKnown RBP12.97□□□□□ -0.33
LINC01116-202ENST00000339037 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.33
LINC01116-202ENST00000339037 TIMM23O14925 209 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 ARPC2O15144 300 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 GADD45GO95257 159 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 LCATP04180 440 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 MMP9P14780 707 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 GYS2P54840 703 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 HOXA4Q00056 320 aaPredicted RBP12.96□□□□□ -0.33
LINC01116-202ENST00000339037 TRAP1Q12931 704 aaKnown RBP12.96□□□□□ -0.33
LINC01116-202ENST00000339037 KRT72Q14CN4 511 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 OR8G1Q15617 311 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 METTL11BQ5VVY1 283 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 SLC18B1Q6NT16 456 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 MRPL21Q7Z2W9 205 aaKnown RBP12.96□□□□□ -0.33
LINC01116-202ENST00000339037 LINC00346Q8IVM7 164 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 PGAM4Q8N0Y7 254 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 OR6V1Q8N148 313 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 PNLDC1Q8NA58 520 aaKnown RBP12.96□□□□□ -0.33
LINC01116-202ENST00000339037 DYRK2Q92630 601 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 SLCO4A1Q96BD0 722 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
LINC01116-202ENST00000339037 TBX15Q96SF7 602 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 TRIM15Q9C019 465 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 OR52D1Q9H346 318 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 ACOXLQ9NUZ1 547 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 ARL8BQ9NVJ2 186 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 RNF7Q9UBF6 113 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 CTSZQ9UBR2 303 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 CD300AQ9UGN4 299 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 B9D1Q9UPM9 204 aa12.96□□□□□ -0.33
LINC01116-202ENST00000339037 CENPVL3A0A0U1RRI6 287 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms