RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FKBP14Q9NWM8 211 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 FAM206AQ9NX38 181 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 ITGB1BP2Q9UKP3 347 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 SNX5Q9Y5X3 404 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 R4GMQ9 66 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 PRR14LQ5THK1 2151 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 LRBAP50851 2863 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 POLQO75417 2590 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 OVOL3O00110 214 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 MAGEB4O15481 346 aaPredicted RBP13.18□□□□□ -0.3
SEC13-201ENST00000337354 MT-ND5P03915 603 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 KITLGP21583 273 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 PSG7Q13046 419 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 GK2Q14410 553 aaPredicted RBP13.18□□□□□ -0.3
SEC13-201ENST00000337354 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
SEC13-201ENST00000337354 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 TMPRSS11AQ6ZMR5 421 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 PGAP1Q75T13 922 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 SGK3Q96BR1 496 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 MBD6Q96DN6 1003 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 SIGLEC11Q96RL6 698 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 SYT3Q9BQG1 590 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
SEC13-201ENST00000337354 DUSP21Q9H596 190 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 PTTG3PQ9NZH4 202 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 NUFIP1Q9UHK0 495 aaKnown RBP13.18□□□□□ -0.3
SEC13-201ENST00000337354 GNG8Q9UK08 70 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 BLOC1S6Q9UL45 172 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 FZR1Q9UM11 496 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
SEC13-201ENST00000337354 LRRC42Q9Y546 428 aa13.18□□□□□ -0.3
SEC13-201ENST00000337354 HRNRQ86YZ3 2850 aaPredicted RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 A0A0U1RQV5 110 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 A0A1W2PPW3 197 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 LOC110117498-PIK3R3F6TDL0 507 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 J3QLW9 94 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 M0R233 179 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 TBX1O43435 398 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 SRSF10O75494 262 aaKnown RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 CLPTM1O96005 669 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 PNPP00491 289 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 PAX1P15863 534 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 ZNF19P17023 458 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 CRHBPP24387 322 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 MPV17P39210 176 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 DDOSTP39656 456 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 PPOXP50336 477 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 OR12D2P58182 307 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 ZNF92Q03936 586 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 TIGD6Q17RP2 521 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 TP53I3Q53FA7 332 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 MRPL21Q7Z2W9 205 aaKnown RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 LRP11Q86VZ4 500 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 RORBQ92753 470 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 C4orf36Q96KX1 117 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 PURGQ9UJV8 347 aaKnown RBP13.17□□□□□ -0.3
SEC13-201ENST00000337354 PLEKHA6Q9Y2H5 1048 aa13.17□□□□□ -0.3
SEC13-201ENST00000337354 ABCA4P78363 2273 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 H7C417 338 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 RPP14O95059 124 aaKnown RBP13.16□□□□□ -0.3
SEC13-201ENST00000337354 CDK1P06493 297 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 SLC35A2P78381 396 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
SEC13-201ENST00000337354 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 ZMAT1Q5H9K5 638 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 FDX2Q6P4F2 183 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 ELMOD2Q8IZ81 293 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 ZNF786Q8N393 782 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 RHNO1Q9BSD3 238 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 DYNLRB1Q9NP97 96 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 G6PC2Q9NQR9 355 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 ACOXLQ9NUZ1 547 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 ZNF701Q9NV72 531 aaPredicted RBP13.16□□□□□ -0.3
SEC13-201ENST00000337354 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 ZNF319Q9P2F9 582 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 OR52A1Q9UKL2 312 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 PCDHGB5Q9Y5G0 923 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 AKAP6Q13023 2319 aa13.16□□□□□ -0.3
SEC13-201ENST00000337354 CREBBPQ92793 2442 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 IQCF6A8MYZ5 107 aa13.15□□□□□ -0.3
SEC13-201ENST00000337354 TIMM8AO60220 97 aaPredicted RBP13.15□□□□□ -0.3
SEC13-201ENST00000337354 ERCC1P07992 297 aaPredicted RBP13.15□□□□□ -0.3
SEC13-201ENST00000337354 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
SEC13-201ENST00000337354 C21orf33P30042 268 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms