RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RAB6AP20340 208 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 PTBP1P26599 531 aaKnown RBP eCLIP7.36□□□□□ -1.23
HPS4-201ENST00000336873 CAV2P51636 162 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 GABREP78334 506 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 PLAURQ03405 335 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SKP2Q13309 424 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 RSU1Q15404 277 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 AANATQ16613 207 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 ELP5Q8TE02 316 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 FBXW5Q969U6 566 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SORCS2Q96PQ0 1159 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 PELOQ9BRX2 385 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 ULBP2Q9BZM5 246 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 EIF5A2Q9GZV4 153 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 DCAF16Q9NXF7 216 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 PCDHGA9Q9Y5G4 932 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 IGKV1D-43A0A0B4J1Z2 117 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SLC22A23A1A5C7 686 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 XRCC3O43542 346 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 ZNF354AO60765 605 aaPredicted RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 PRAF2O60831 178 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 TIAF1O95411 115 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 DIRAS3O95661 229 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 IGHG1P01857 330 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 LPLP06858 475 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SMIM10L1P0DMW3 83 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 KLK2P20151 261 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 EPHA1P21709 976 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SERPINF1P36955 418 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 KIR3DL2P43630 455 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 CSNK1A1P48729 337 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 ZNF121P58317 390 aaPredicted RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 RPS11P62280 158 aaKnown RBP eCLIP7.36□□□□□ -1.23
HPS4-201ENST00000336873 EFNB1P98172 346 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 KLF9Q13886 244 aaPredicted RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 TUSC1Q2TAM9 212 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SLC35D3Q5M8T2 416 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 TIGD3Q6B0B8 471 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 GLDNQ6ZMI3 551 aaPredicted RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 GLRX5Q86SX6 157 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 RTN4RL2Q86UN3 420 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SLC38A9Q8NBW4 561 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 OR6M1Q8NGM8 313 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SMIM10Q96HG1 83 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 URM1Q9BTM9 101 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 TXNIPQ9H3M7 391 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 B3GNT2Q9NY97 397 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 TAS2R5Q9NYW4 299 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 NXT1Q9UKK6 140 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 HIF3AQ9Y2N7 669 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 NAP1L6A6NFF2 107 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 LMO7DNF2Z398 122 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 XRCC2O43543 280 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 TNFSF14O43557 240 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 GLAP06280 429 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 TPOP07202 933 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 DAP3P51398 398 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 RRADP55042 308 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 H2BFSP57053 126 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SLC26A5P58743 744 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 POLR2GP62487 172 aaKnown RBP eCLIP7.36□□□□□ -1.23
HPS4-201ENST00000336873 DHRS2Q13268 280 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 PPP1R1AQ13522 171 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 TSC22D1Q15714 1073 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 LINC01590Q5TEZ4 76 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 AKR7LQ8NHP1 331 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 C15orf40Q8WUR7 153 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 SLAMF9Q96A28 289 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 CTHRC1Q96CG8 243 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 FOXRED1Q96CU9 486 aaPredicted RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 KCNJ15Q99712 375 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 ZNF416Q9BWM5 594 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 ESRP2Q9H6T0 727 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 C14orf166Q9Y224 244 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 MEIKINA0A087WXM9 373 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 SOCS1O15524 211 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 HSPA12AO43301 675 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 PIAS2O75928 621 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZFAND5O76080 213 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CNOT4O95628 575 aaKnown RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 APOC1P02654 83 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CD79AP11912 226 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 BTCP35070 178 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 OR3A4PP47883 348 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZP1P60852 638 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 DCDP81605 110 aaKnown RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF141Q15928 474 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 KRBOX4Q5JUW0 171 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 MANEAQ5SRI9 462 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 TSPO2Q5TGU0 170 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ADGRE4PQ86SQ3 457 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF611Q8N823 705 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 HSD17B11Q8NBQ5 300 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 OR1N1Q8NGS0 311 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 STK35Q8TDR2 534 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ASB5Q8WWX0 329 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 DYRK2Q92630 601 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 HOXB13Q92826 284 aaPredicted RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 SGCZQ96LD1 299 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms