RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 C12orf73Q69YU5 71 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 FAM221AA4D161 298 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 SPRY3O43610 288 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 TSPAN9O75954 239 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 TMIGD3P0DMS9 266 aaPredicted RBP13.46□□□□□ -0.25
C9orf47-201ENST00000334490 OPRM1P35372 400 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 CD79BP40259 229 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 STAC2Q6ZMT1 411 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF546Q86UE3 836 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 FAM185AQ8N0U4 392 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 SUN5Q8TC36 379 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 HES7Q9BYE0 225 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 ARID1AO14497 2285 aa13.46□□□□□ -0.25
C9orf47-201ENST00000334490 AIPO00170 330 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 IFNA10P01566 189 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 TCRBP04435 133 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 GP1BAP07359 652 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 CSF3P09919 207 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 SMIM18P0DKX4 95 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 GABRA1P14867 456 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 OMGP23515 440 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 CCR9P51686 369 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 NLRC3Q7RTR2 1065 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 OR51H1Q8NH63 302 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 MCHR2Q969V1 340 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 C12orf10Q9HB07 376 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 A3GALT2U3KPV4 340 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 A0A1W2PPV4 95 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 OR6C68A6NDL8 312 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 GFRA3O60609 400 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF32P17041 273 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 SRP9P49458 86 aaKnown RBP13.46□□□□□ -0.26
C9orf47-201ENST00000334490 RAB35Q15286 201 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 BEX5Q5H9J7 111 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 C1QL3Q5VWW1 255 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 ZAR1Q86SH2 424 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 CISD2Q8N5K1 135 aaKnown RBP13.46□□□□□ -0.26
C9orf47-201ENST00000334490 ST7LQ8TDW4 575 aa13.46□□□□□ -0.26
C9orf47-201ENST00000334490 ACACAQ13085 2346 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 IFITM5A6NNB3 132 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 ELK1P19419 428 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 CCR6P51684 374 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 C9orf152Q5JTZ5 239 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 SLC25A21Q9BQT8 299 aaPredicted RBP13.45□□□□□ -0.26
C9orf47-201ENST00000334490 METTL17Q9H7H0 456 aaPredicted RBP13.45□□□□□ -0.26
C9orf47-201ENST00000334490 A0A1W2PQD3 144 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 HSD17B6O14756 317 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 MSTNO14793 375 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 HOXA1P49639 335 aaPredicted RBP13.45□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF136P52737 540 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 RAP2BP61225 183 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 SORDQ00796 357 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 THSD4Q6ZMP0 1018 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 OIT3Q8WWZ8 545 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 NMNAT2Q9BZQ4 307 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 PLPP3O14495 311 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 ATF4P18848 351 aaPredicted RBP13.45□□□□□ -0.26
C9orf47-201ENST00000334490 DDOSTP39656 456 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 CDK5Q00535 292 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 KCNJ8Q15842 424 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 C3AR1Q16581 482 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 NOXA1Q86UR1 476 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 FAM109AQ8N4B1 249 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 PLEKHF2Q9H8W4 249 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 UGT2A1Q9Y4X1 527 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 ANKRD34BA5PLL1 514 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 ABCD4O14678 606 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 CLDN1O95832 211 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 APOC3P02656 99 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 CTXN2P0C2S0 81 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 HMGA2P52926 109 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 OR10A3P58181 314 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 PABPC1L2AQ5JQF8 200 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 C6orf183Q5T699 404 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 SHEQ5VZ18 495 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 SLC38A9Q8NBW4 561 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 TSPAN32Q96QS1 320 aa13.45□□□□□ -0.26
C9orf47-201ENST00000334490 C11orf54Q9H0W9 315 aaPredicted RBP13.45□□□□□ -0.26
C9orf47-201ENST00000334490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.45□□□□□ -0.26
C9orf47-201ENST00000334490 IGKV1-8A0A0C4DH67 115 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 GPANK1O95872 356 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 CT45A8P0DMV1 189 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 CT45A9P0DMV2 189 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 S100A2P29034 98 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 CT45A2Q5DJT8 189 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 OR52W1Q6IF63 320 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 DRAM2Q6UX65 266 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 FJX1Q86VR8 437 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 FBXL14Q8N1E6 418 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 OR51S1Q8NGJ8 323 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 TCTEX1D2Q8WW35 142 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 ST3GAL6Q9Y274 331 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 TNFRSF1AP19438 455 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 BCL2A1Q16548 175 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF774Q6NX45 483 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 C9orf40Q8IXQ3 194 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms