RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 OR5AC2Q9NZP5 309 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ARHGEF17Q96PE2 2063 aaPredicted RBP12.29□□□□□ -0.44
SYNE3-201ENST00000334258 LMX1BO60663 402 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 SFTPBP07988 381 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 LPAR6P43657 344 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 CX3CR1P49238 355 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 BTG2P78543 158 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 WDSUB1Q8N9V3 476 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 MRGPRFQ96AM1 343 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 CDC6Q99741 560 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 SSX3Q99909 188 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 TAF9BQ9HBM6 251 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 A0A0A6YYH2 397 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 LOC107986453A0A1B0GWG9 222 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 A6NJ64 397 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
SYNE3-201ENST00000334258 FBP1P09467 338 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF44P15621 663 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 CXCR1P25024 350 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ID4P47928 161 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
SYNE3-201ENST00000334258 Q6ZS52 159 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 PAQR4Q8N4S7 273 aaPredicted RBP12.28□□□□□ -0.44
SYNE3-201ENST00000334258 POM121Q96HA1 1249 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 SLC2A8Q9NY64 477 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF107Q9UII5 783 aaPredicted RBP12.28□□□□□ -0.44
SYNE3-201ENST00000334258 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 EML5Q05BV3 1969 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 HSPB2A8KAH6 182 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 RAB27BO00194 218 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 DAOP14920 347 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 NQO2P16083 231 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 OR2B8PP59922 312 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 HSPB2Q16082 182 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ADAM5Q6NVV9 412 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF101Q8IZC7 436 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 FAM160A2Q8N612 972 aaPredicted RBP12.28□□□□□ -0.44
SYNE3-201ENST00000334258 FLVCR1-AS1Q8TAF5 88 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 OR10A5Q9H207 317 aa12.28□□□□□ -0.44
SYNE3-201ENST00000334258 NCOR1O75376 2440 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 A0A1W2PPE3 182 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 C5orf52A6NGY3 159 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 TNFSF14O43557 240 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 HCRTR1O43613 425 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 MPZL1O95297 269 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 TXNDC12O95881 172 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 ADH1BP00325 375 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 CTSBP07858 339 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 EIF5AP63241 154 aaKnown RBP12.27□□□□□ -0.45
SYNE3-201ENST00000334258 ACKR1Q16570 336 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 DHRS11Q6UWP2 260 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 COX15Q7KZN9 410 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 OOSP2Q86WS3 158 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 METTL27Q8N6F8 245 aaPredicted RBP12.27□□□□□ -0.45
SYNE3-201ENST00000334258 C15orf54Q8N8G6 183 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 OR51F2Q8NH61 342 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 SECTM1Q8WVN6 248 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 HIST1H2BAQ96A08 127 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 KIRREL1Q96J84 757 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 NMES1Q9C002 83 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 KIF26BQ2KJY2 2108 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 PRR19A6NJB7 356 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 A6NLC8 198 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 P2RY10O00398 339 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 HCRTR2O43614 444 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 HOXB5P09067 269 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 RCC1P18754 421 aaPredicted RBP12.27□□□□□ -0.45
SYNE3-201ENST00000334258 CD1CP29017 333 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 TAS2R31P59538 309 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 AWAT2Q6E213 333 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
SYNE3-201ENST00000334258 AQP3Q92482 292 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 FGGYQ96C11 551 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 SAT2Q96F10 170 aaPredicted RBP12.27□□□□□ -0.45
SYNE3-201ENST00000334258 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 LURAP1Q96LR2 239 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 NECAB3Q96P71 396 aaPredicted RBP12.27□□□□□ -0.45
SYNE3-201ENST00000334258 TCEAL7Q9BRU2 100 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 RGCCQ9H4X1 137 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 PRTFDC1Q9NRG1 225 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 UBQLN4Q9NRR5 601 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 SEC16AO15027 2179 aa12.27□□□□□ -0.45
SYNE3-201ENST00000334258 TMEM269A0A1B0GVZ9 245 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 C9JQL5 133 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 ZNF264O43296 627 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 NUDT21O43809 227 aaKnown RBP12.26□□□□□ -0.45
SYNE3-201ENST00000334258 CFPP27918 469 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 CTHP32929 405 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 ZP2Q05996 745 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 RAB32Q13637 225 aa12.26□□□□□ -0.45
SYNE3-201ENST00000334258 FDX2Q6P4F2 183 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms