RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 RPL4P36578 427 aaKnown RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 CD200P41217 278 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 DPTQ07507 201 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 ALG10BQ5I7T1 473 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 METRNLQ641Q3 311 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 MTSS1LQ765P7 747 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 LYPD6Q86Y78 171 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 ZNF615Q8N8J6 731 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 PCSK9Q8NBP7 692 aaKnown RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 ZNRF4Q8WWF5 429 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 HOXB13Q92826 284 aaPredicted RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 SLC22A18Q96BI1 424 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 C20orf24Q9BUV8 137 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 FBXL17Q9UF56 701 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 OR14J1Q9UGF5 321 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 DHDHQ9UQ10 334 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 COL4A2P08572 1712 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 FEZF1A0PJY2 475 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 PPP5D1E7EU14 171 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 PQBP1O60828 265 aaKnown RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 GSTP1P09211 210 aaKnown RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 ST6GAL1P15907 406 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 FCGR2CP31995 323 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 TAGLN2P37802 199 aaKnown RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 THPOP40225 353 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 KIR3DL2P43630 455 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 NPY4RP50391 375 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 ZNF117Q03924 483 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 LEG1Q6P5S2 330 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 CXCL17Q6UXB2 119 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 Q6ZVU0 165 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 SLC25A26Q70HW3 274 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 C5orf24Q7Z6I8 188 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 PPP1R3BQ86XI6 285 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 OR51L1Q8NGJ5 315 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 OR5L2Q8NGL0 311 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 ACY3Q96HD9 319 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 PRRX2Q99811 253 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 SPOCK3Q9BQ16 436 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 ANGPTL4Q9BY76 406 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 OR11A1Q9GZK7 315 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 OR8D2Q9GZM6 311 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 AICDAQ9GZX7 198 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 OPN3Q9H1Y3 402 aaPredicted RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 ASCL3Q9NQ33 180 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 SPHK2Q9NRA0 654 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 C1orf123Q9NWV4 160 aa7.5□□□□□ -1.21
SKA2-201ENST00000330137 MRPS18CQ9Y3D5 142 aaKnown RBP7.5□□□□□ -1.21
SKA2-201ENST00000330137 A0A1W2PQ45 241 aaPredicted RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 A0A1W2PQY0 241 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 TMEM235A6NFC5 223 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 TMEM210A6NLX4 147 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 E5RGE8 158 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 FTCDNL1E5RQL4 147 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 H3BQ15 152 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 PEX12O00623 359 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ERI3O43414 337 aaKnown RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 KCNAB3O43448 404 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 BPNT1O95861 308 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ISG15P05161 165 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 GALTP07902 379 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ELFN1P0C7U0 828 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ZNF708P17019 499 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 CCKBRP32239 447 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 HRH1P35367 487 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 PDLIM4P50479 330 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 TMEM33P57088 247 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 UBE2KP61086 200 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ROM1Q03395 351 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ZNHIT3Q15649 155 aaPredicted RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 IQCJQ1A5X6 159 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 GLYATL3Q5SZD4 288 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 BTNL3Q6UXE8 466 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 OR51A2Q8NGJ7 313 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 OIT3Q8WWZ8 545 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 TMEM230Q96A57 120 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 IL17FQ96PD4 163 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ZNF385AQ96PM9 386 aaKnown RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 KXD1Q9BQD3 176 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 FLRT3Q9NZU0 649 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 KIAA1456Q9P272 454 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 HIF3AQ9Y2N7 669 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 NSG2Q9Y328 171 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 PDE4DIPQ5VU43 2346 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 LOC100509620A0A075B734 347 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 TP53I11O14683 189 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 TRGC2P03986 189 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 RPLP1P05386 114 aaKnown RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 CKMP06732 381 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 NGFRP08138 427 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 CXCL1P09341 107 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 ACAA2P42765 397 aaKnown RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 MMP16P51512 607 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 BTG2P78543 158 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 SPOCK1Q08629 439 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 PRDX4Q13162 271 aa7.49□□□□□ -1.21
SKA2-201ENST00000330137 EIF2B1Q14232 305 aaKnown RBP7.49□□□□□ -1.21
SKA2-201ENST00000330137 WDR38Q5JTN6 314 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms