RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SPATC1Q76KD6 591 aa23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 TIGD4Q8IY51 512 aa23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 ZMYND19Q96E35 227 aaPredicted RBP23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 MEGF10Q96KG7 1140 aa23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 ABHD6Q9BV23 337 aa23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 GCM1Q9NP62 436 aa23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 DCAF16Q9NXF7 216 aa23.32■■□□□ 1.32
ATPAF1-201ENST00000329231 TANC2Q9HCD6 1990 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 TRAV20A0A0B4J274 112 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 A0A1B0GWJ7 208 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 H0YL77 283 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 MLNRO43193 412 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 SNAPC1Q16533 368 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 SLC35D3Q5M8T2 416 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 RHOUQ7L0Q8 258 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 RNF133Q8WVZ7 376 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 REPIN1Q9BWE0 567 aaKnown RBP23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 SEMA6AQ9H2E6 1030 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 SP140LQ9H930 580 aa23.31■■□□□ 1.32
ATPAF1-201ENST00000329231 H3BNX3 289 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 IGHV2-70P01814 119 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 APOC1P02654 83 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 SBK2P0C263 348 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 HSD11B1P28845 292 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 ESRRGP62508 458 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 ZNF92Q03936 586 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 GLYATL3Q5SZD4 288 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 OR2AE1Q8NHA4 323 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 SLC22A4Q9H015 551 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 OPA3Q9H6K4 179 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 KRT84Q9NSB2 600 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 TVP23BQ9NYZ1 205 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 UBAP1Q9NZ09 502 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 NOP16Q9Y3C1 178 aaKnown RBP23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 N6AMT1Q9Y5N5 214 aa23.3■■□□□ 1.32
ATPAF1-201ENST00000329231 DYSFO75923 2080 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 GGT3PA6NGU5 568 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 CD300LBA8K4G0 201 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 F5H5P2 479 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 HLA-DPB1P04440 258 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 SLC2A1P11166 492 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 THBS2P35442 1172 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 CX3CR1P49238 355 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 MMP16P51512 607 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 RAD23AP54725 363 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 RPS7P62081 194 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 CXXC5Q7LFL8 322 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 ZNF454Q8N9F8 522 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 SIGLEC11Q96RL6 698 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 PRRG3Q9BZD7 231 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 PCDHB10Q9UN67 800 aa23.29■■□□□ 1.32
ATPAF1-201ENST00000329231 TMEM178BH3BS89 294 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 XRCC2O43543 280 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 PLPP2O43688 288 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 SRP14P37108 136 aaKnown RBP23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 BTG1P62324 171 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 HNRNPA0Q13151 305 aaKnown RBP23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 PTGES3Q15185 160 aaKnown RBP23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 TMEM155Q4W5P6 130 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 KDM4DQ6B0I6 523 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 KLHL36Q8N4N3 616 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 SPICQ8N5J4 248 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 CELF2-AS1Q8N7Q2 184 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 OTOSQ8NHW6 89 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 PKP2Q99959 881 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 OAZ3Q9UMX2 235 aa23.28■■□□□ 1.32
ATPAF1-201ENST00000329231 C5orf63A6NC05 138 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 SELENOFO60613 162 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 ANXA2P07355 339 aaKnown RBP23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 LYNP07948 512 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 SLC2A5P22732 501 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 ANOS1P23352 680 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 OPRL1P41146 370 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 ZNF771Q7L3S4 317 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 LRRC28Q86X40 367 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 BBS1Q8NFJ9 593 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 THEM6Q8WUY1 208 aa23.27■■□□□ 1.32
ATPAF1-201ENST00000329231 LRRC30A6NM36 301 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 TBX1O43435 398 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 MITFO75030 526 aaPredicted RBP23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 H2BFMP0C1H6 154 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 GATA4P43694 442 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 APOFQ13790 326 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 OR8G1Q15617 311 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 ZNF181Q2M3W8 571 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 MOGAT3Q86VF5 341 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 ZNF420Q8TAQ5 688 aaPredicted RBP23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 SPSB4Q96A44 273 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 AMELYQ99218 206 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 MDFIQ99750 246 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 OSBPL10Q9BXB5 764 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 MRPL15Q9P015 296 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 ENOPH1Q9UHY7 261 aa23.26■■□□□ 1.31
ATPAF1-201ENST00000329231 SAC3D1A6NKF1 404 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 GMDSO60547 372 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 CA6P23280 308 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 RBMXP38159 391 aaKnown RBP23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 MDH2P40926 338 aaKnown RBP23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 CD200P41217 278 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms