RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SVBPQ8N300 66 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 DNASE2BQ8WZ79 361 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 TRGV8A0A0C4DH27 118 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 PRSS44E7EML9 344 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 M0R1B8 84 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 GIPP09681 153 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 FOSL1P15407 271 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 RAB6AP20340 208 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 KITLGP21583 273 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 GLRA1P23415 457 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 MDH2P40926 338 aaKnown RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 RBMS3Q6XE24 437 aaKnown RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 OR4C3Q8NH37 302 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 PAQR8Q8TEZ7 354 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 C19orf12Q9NSK7 152 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 GRPP07492 148 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 IGFBP1P08833 259 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 LSM6P62312 80 aaKnown RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 TMEM200AQ86VY9 491 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 BBS1Q8NFJ9 593 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 LIN37Q96GY3 246 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 GALNT9Q9HCQ5 603 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 ACKR4Q9NPB9 350 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 CGGBP1Q9UFW8 167 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 SMCHD1A6NHR9 2005 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 PLPP3O14495 311 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 ZNF136P52737 540 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 EDDM3BP56851 147 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 ZNF121P58317 390 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 TFF2Q03403 129 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 WIPI1Q5MNZ9 446 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 CATSPERDQ86XM0 798 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 OR10R2Q8NGX6 335 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 OR4Q3Q8NH05 313 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 UBE2FQ969M7 185 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 TUBG2Q9NRH3 451 aa10.26□□□□□ -0.77
COL4A5-201ENST00000328300 LIN7CQ9NUP9 197 aaKnown RBP10.26□□□□□ -0.77
COL4A5-201ENST00000328300 AQP7P3A6NL99 342 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ST8SIA5O15466 376 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ADRA2CP18825 462 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 EVX1P49640 407 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 RAB5CP51148 216 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 APOBEC4Q8WW27 367 aaKnown RBP10.25□□□□□ -0.77
COL4A5-201ENST00000328300 CORO2AQ92828 525 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SNRPGP15A8MWD9 76 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 PLPP2O43688 288 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 Q6ZNX1 250 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 GABRG1Q8N1C3 465 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 AMER3Q8N944 861 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 HRASLSQ9HDD0 168 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 B4GALT1P15291 398 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SLC37A1P57057 533 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SLC22A25Q6T423 547 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ATG4DQ86TL0 474 aaPredicted RBP10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SLC35G3Q8N808 338 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ROBO4Q8WZ75 1007 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 CYSLTR2Q9NS75 346 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ANKRD33BA6NCL7 494 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ZNF883P0CG24 379 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 OSR2Q8N2R0 312 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ADPRHL1Q8NDY3 354 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 HAS2Q92819 552 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 RASL10BQ96S79 203 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 S1PR3Q99500 378 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 DLL4Q9NR61 685 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 PSME4Q14997 1843 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 ABCD4O14678 606 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 PHF1O43189 567 aaPredicted RBP10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SNRNP70P08621 437 aaKnown RBP10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SLC2A1P11166 492 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 MYF5P13349 255 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 SLC51BQ86UW2 128 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 FAM181AQ8N9Y4 354 aa10.25□□□□□ -0.77
COL4A5-201ENST00000328300 H1FXQ92522 213 aaKnown RBP10.25□□□□□ -0.77
COL4A5-201ENST00000328300 OTOL1A6NHN0 477 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-201ENST00000328300 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 FGF5P12034 268 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 DUSP1P28562 367 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 AVPR2P30518 371 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 FABP5Q01469 135 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 ZNF85Q03923 595 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 GPX8Q8TED1 209 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 FRZBQ92765 325 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 ARSGQ96EG1 525 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 PLA2G12AQ9BZM1 189 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 SLC22A13Q9Y226 551 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 LRP12Q9Y561 859 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 GMDSO60547 372 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 AADACP22760 399 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 UBE2MP61081 183 aaKnown RBP10.24□□□□□ -0.77
COL4A5-201ENST00000328300 CDC20Q12834 499 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 RTL8BQ17RB0 113 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 PRSS41Q7RTY9 318 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 SUMF2Q8NBJ7 301 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 OR4D6Q8NGJ1 314 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 TSPAN32Q96QS1 320 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 DOK1Q99704 481 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 TGIF2Q9GZN2 237 aa10.24□□□□□ -0.77
COL4A5-201ENST00000328300 METTL17Q9H7H0 456 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-201ENST00000328300 CHST2Q9Y4C5 530 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms