RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OR2J2O76002 312 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 S100A8P05109 93 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 RAG2P55895 527 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZP1P60852 638 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 RPL27P61353 136 aaKnown RBP13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNF117Q03924 483 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 PMPCAQ10713 525 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 SLC5A7Q9GZV3 580 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ETV7Q9Y603 341 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 NOTCH4Q99466 2003 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 A0A087WZY1 265 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 MEGF11A6BM72 1044 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 TBX19O60806 448 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 SFTA3P0C7M3 94 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 PPICP45877 212 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 LIMS1P48059 325 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 CPEB2Q7Z5Q1 589 aaKnown RBP13.73□□□□□ -0.21
VARS2-201ENST00000321897 NT5CQ8TCD5 201 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 THRSPQ92748 146 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 RAB3CQ96E17 227 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 KCNJ15Q99712 375 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 MMP25Q9NPA2 562 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 PLEKHJ1Q9NW61 149 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 LRFN1Q9P244 771 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNF705FA8MVS1 300 aaPredicted RBP13.73□□□□□ -0.21
VARS2-201ENST00000321897 PPP1R2P9O14990 202 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNHIT1O43257 154 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 RECKO95980 971 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNF705DP0CH99 300 aaPredicted RBP13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNF705BP0CI00 300 aaPredicted RBP13.73□□□□□ -0.21
VARS2-201ENST00000321897 HRH1P35367 487 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 PTGFRP43088 359 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNF74Q16587 644 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 VASH2Q86V25 355 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 NR2C2APQ86WQ0 139 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 BHLHE23Q8NDY6 225 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 OR5D14Q8NGL3 314 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 PNPLA2Q96AD5 504 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ZNF845Q96IR2 970 aaPredicted RBP13.73□□□□□ -0.21
VARS2-201ENST00000321897 PRSS27Q9BQR3 290 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 ABHD6Q9BV23 337 aa13.73□□□□□ -0.21
VARS2-201ENST00000321897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.73□□□□□ -0.21
VARS2-201ENST00000321897 TRAV1-2A0A0B4J238 106 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 THY1P04216 161 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 IL5P05113 134 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 VSIG10L2P0DP72 767 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 PTAFRP25105 342 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 G0S2P27469 103 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 LYSMD4Q5XG99 296 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 PWWP2BQ6NUJ5 590 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 NPSR1Q6W5P4 371 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 NAXDQ8IW45 347 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
VARS2-201ENST00000321897 A0A1B0GX78 115 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 UMAD1C9J7I0 102 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 PHOX2AO14813 284 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 ZFAND5O76080 213 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 NAGAP17050 411 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 ALOX5APP20292 161 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 FCARP24071 287 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 CSNK1A1P48729 337 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 DAP3P51398 398 aaKnown RBP13.72□□□□□ -0.21
VARS2-201ENST00000321897 TMEM255AQ5JRV8 349 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 RNLSQ5VYX0 342 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 FJX1Q86VR8 437 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 SPICQ8N5J4 248 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 A0A0U1RQK1 487 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 OR6C76A6NM76 312 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 LAMTOR5O43504 91 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 ABCD3P28288 659 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 CCINQ13939 588 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 PDCD1Q15116 288 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 RSU1Q15404 277 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 C1orf53Q5VUE5 145 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 SGPP2Q8IWX5 399 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 SLC22A18ASQ8N1D0 253 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 RXFP4Q8TDU9 374 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 HPSE2Q8WWQ2 592 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 RGP1Q92546 391 aaPredicted RBP13.72□□□□□ -0.21
VARS2-201ENST00000321897 SMOC1Q9H4F8 434 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 TUBG2Q9NRH3 451 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 PISDQ9UG56 409 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 KCNMB2Q9Y691 235 aa13.72□□□□□ -0.21
VARS2-201ENST00000321897 A6NLC8 198 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 GLSO94925 669 aaPredicted RBP13.71□□□□□ -0.21
VARS2-201ENST00000321897 CTLA4P16410 223 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 PPP1R1AQ13522 171 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 NHLRC3Q5JS37 347 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 WDR38Q5JTN6 314 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 SHEQ5VZ18 495 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 ZNF611Q8N823 705 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 MRPS24Q96EL2 167 aaKnown RBP13.71□□□□□ -0.21
VARS2-201ENST00000321897 ULBP2Q9BZM5 246 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 C1orf198Q9H425 327 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 CRLF2Q9HC73 371 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 CHRNA9Q9UGM1 479 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 PHYHO14832 338 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 CYTIPO60759 359 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms