RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 A0A0A6YYD4 124 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TEX13DA0A0J9YY54 714 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 METTL12A8MUP2 240 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NDUFA2O43678 99 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 IL32P24001 234 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PSMB6P28072 239 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 CX3CR1P49238 355 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 FBXW4P57775 412 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 HNRNPKP61978 463 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLK1-201ENST00000321356 FOXK1P85037 733 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 MC2RQ01718 297 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 FOXF1Q12946 379 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ZNF169Q14929 603 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 PNLIPRP3Q17RR3 467 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 SLC25A53Q5H9E4 307 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 BEX5Q5H9J7 111 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PABPC1L2AQ5JQF8 200 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 C1orf189Q5VU69 101 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PTCRAQ6ISU1 281 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 KLHL24Q6TFL4 600 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 C16orf47Q6ZP98 133 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 COX15Q7KZN9 410 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 RHOUQ7L0Q8 258 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 CCDC36Q8IYA8 594 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR5AS1Q8N127 324 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 INO80EQ8NBZ0 244 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 APCDD1LQ8NCL9 501 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TMEM185AQ8NFB2 350 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR10H5Q8NGA6 315 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR5AP2Q8NGF4 316 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR13C9Q8NGT0 318 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 MARC2Q969Z3 335 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 DDIT4LQ96D03 193 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PIK3IP1Q96FE7 263 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TPSD1Q9BZJ3 242 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NMES1Q9C002 83 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 SELENOIQ9C0D9 397 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TGIF2Q9GZN2 237 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 MOB1AQ9H8S9 216 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 SERINC1Q9NRX5 453 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 SLC22A11Q9NSA0 550 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PCDHB10Q9UN67 800 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 LHFPL6Q9Y693 200 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 EYSQ5T1H1 3165 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 C2orf72A6NCS6 295 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 F5H0A9 414 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 SIGLEC5O15389 551 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 IFNA6P05013 189 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 CHRM2P08172 466 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 H2AFB1P0C5Y9 115 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 VAMP1P23763 118 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 LAP3P28838 519 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ZNF93P35789 620 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 EMP2P54851 167 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 BIDP55957 195 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NXPH1P58417 271 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NAAAQ02083 359 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 SIGLEC14Q08ET2 396 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 VAX1Q5SQQ9 334 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PDSS1Q5T2R2 415 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 AWAT2Q6E213 333 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TMPRSS9Q7Z410 1059 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ANGPTL5Q86XS5 388 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 PLXDC1Q8IUK5 500 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ARRDC1Q8N5I2 433 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 DEFB119Q8N690 84 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ADPRHL1Q8NDY3 354 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NFAM1Q8NET5 270 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 SLC30A7Q8NEW0 376 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TSTD1Q8NFU3 115 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR4K17Q8NGC6 315 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR5T2Q8NGG2 359 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 OR2I1PQ8NGU4 316 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 TERB2Q8NHR7 220 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 MARCH1Q8TCQ1 289 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ELP5Q8TE02 316 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 CASTOR1Q8WTX7 329 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ZNF501Q96CX3 271 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 C5orf34Q96MH7 638 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 CDC6Q99741 560 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NICN1Q9BSH3 213 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 ZNF416Q9BWM5 594 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 NKX6-2Q9C056 277 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 CHMP1AQ9HD42 196 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 TMEM100Q9NV29 134 aa7.72□□□□□ -1.17
CLK1-201ENST00000321356 RPH3AQ9Y2J0 694 aaPredicted RBP7.72□□□□□ -1.17
CLK1-201ENST00000321356 UNC13CQ8NB66 2214 aa7.71□□□□□ -1.17
CLK1-201ENST00000321356 IGLV3-12A0A075B6K2 115 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 A0A0B4J2A0 478 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 IGHV3-20A0A0C4DH32 117 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 TMEM218A2RU14 115 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 VSTM2BA6NLU5 285 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms