RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 HCKP08631 526 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 QDPRP09417 244 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF43P17038 809 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 SGCAQ16586 387 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 RSPO4Q2I0M5 234 aaPredicted RBP15.44■□□□□ 0.06
COL9A1-201ENST00000320755 CLVS2Q5SYC1 327 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 PHF19Q5T6S3 580 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 FAM57BQ71RH2 274 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 LYPD6Q86Y78 171 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 PDZD9Q8IXQ8 264 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 OR4K17Q8NGC6 315 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 PPP1R1CQ8WVI7 109 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 MRPL13Q9BYD1 178 aaKnown RBP15.44■□□□□ 0.06
COL9A1-201ENST00000320755 RHBDD3Q9Y3P4 386 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 OR2AT4A6NND4 320 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 ERCC1P07992 297 aaPredicted RBP15.44■□□□□ 0.06
COL9A1-201ENST00000320755 ATP1B3P54709 279 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 THEM4Q5T1C6 240 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 CDH26Q8IXH8 852 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF283Q8N7M2 679 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 DNASE2BQ8WZ79 361 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 MRGPRX4Q96LA9 322 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 PRRT1Q99946 306 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 PCED1AQ9H1Q7 454 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 WDR13Q9H1Z4 485 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 OR3A4PP47883 348 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 GABREP78334 506 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 NAA40Q86UY6 237 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 STPG2Q8N412 459 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 OR5M8Q8NGP6 311 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 MRGPRFQ96AM1 343 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF75AQ96N20 296 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 A0A1B0GTI1 187 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF726A6NNF4 738 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 SOCS1O15524 211 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 RPA2P15927 270 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 SUMO3P55854 103 aaPredicted RBP15.43■□□□□ 0.06
COL9A1-201ENST00000320755 MEF2DQ14814 521 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 SLC51BQ86UW2 128 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 OR8B12Q8NGG6 310 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF775Q96BV0 537 aaPredicted RBP15.43■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF471Q9BX82 626 aaPredicted RBP15.43■□□□□ 0.06
COL9A1-201ENST00000320755 MRPS28Q9Y2Q9 187 aaKnown RBP15.43■□□□□ 0.06
COL9A1-201ENST00000320755 WDFY4Q6ZS81 3184 aa15.43■□□□□ 0.06
COL9A1-201ENST00000320755 COL5A1P20908 1838 aaPredicted RBP15.43■□□□□ 0.06
COL9A1-201ENST00000320755 IGLV3-12A0A075B6K2 115 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 A0A0A6YYH2 397 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 C5orf63A6NC05 138 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 A6NJ64 397 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 PGA4P0DJD7 388 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 PGA3P0DJD8 388 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 PI3P19957 117 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 MPGP29372 298 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 PTGDSP41222 190 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 LUMP51884 338 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-201ENST00000320755 SPEM1Q8N4L4 309 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 MARCH1Q8TCQ1 289 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 JSRP1Q96MG2 331 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-201ENST00000320755 GPR160Q9UJ42 338 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 FREM2Q5SZK8 3169 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 IGHV3-15A0A0B4J1V0 119 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 IGHV5-10-1A0A0J9YXX1 117 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 C5orf51A6NDU8 294 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 TUBAL3A6NHL2 446 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF878C9JN71 531 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 CD37P11049 281 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 RAB6AP20340 208 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 ARHGDIBP52566 201 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 ELP2Q6IA86 826 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 NOXO1Q8NFA2 376 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 OR5M9Q8NGP3 310 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 OR10R2Q8NGX6 335 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 OR6S1Q8NH40 331 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 OR1S1Q8NH92 325 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 RASL10BQ96S79 203 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 SPSB2Q99619 263 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 VRK1Q99986 396 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-201ENST00000320755 OCIAD1Q9NX40 245 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 PRR13Q9NZ81 148 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 SULT2B1O00204 365 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 SIGLEC6O43699 453 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 TRAF3IP2O43734 574 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-201ENST00000320755 ATF4P18848 351 aaPredicted RBP15.42■□□□□ 0.06
COL9A1-201ENST00000320755 CXCL12P48061 93 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 STARP49675 285 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 CLDN17P56750 224 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 FAM219AQ8IW50 185 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 OR6K3Q8NGY3 331 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 ST8SIA2Q92186 375 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 CCDC74BQ96LY2 380 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 EDEM2Q9BV94 578 aa15.42■□□□□ 0.06
COL9A1-201ENST00000320755 CRTAPO75718 401 aaPredicted RBP15.41■□□□□ 0.06
COL9A1-201ENST00000320755 BPNT1O95861 308 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 MELTFP08582 738 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 SLC6A9P48067 706 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 QRFPP83859 136 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 HDDC2Q7Z4H3 204 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 LYG2Q86SG7 212 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 ARMC10Q8N2F6 343 aa15.41■□□□□ 0.06
COL9A1-201ENST00000320755 OR4K15Q8NH41 348 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms