RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ITFG2Q969R8 447 aa15.6■□□□□ 0.09
RAB39A-201ENST00000320578 METTL17Q9H7H0 456 aaPredicted RBP15.6■□□□□ 0.09
RAB39A-201ENST00000320578 CLEC4AQ9UMR7 237 aa15.6■□□□□ 0.09
RAB39A-201ENST00000320578 RHBDD3Q9Y3P4 386 aa15.6■□□□□ 0.09
RAB39A-201ENST00000320578 ZNF407Q9C0G0 2248 aa15.6■□□□□ 0.09
RAB39A-201ENST00000320578 DHRS3O75911 302 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
RAB39A-201ENST00000320578 THBS4P35443 961 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 GNALP38405 381 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 SLC6A9P48067 706 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 POU3F4P49335 361 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 TAB1Q15750 504 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 GLYATL3Q5SZD4 288 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 FBXW9Q5XUX1 488 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.59■□□□□ 0.09
RAB39A-201ENST00000320578 NRARPQ7Z6K4 114 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 OR51D1Q8NGF3 324 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 SMIM4Q8WVI0 70 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 C11orf54Q9H0W9 315 aaPredicted RBP15.59■□□□□ 0.09
RAB39A-201ENST00000320578 RGCCQ9H4X1 137 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 AHRRA9YTQ3 701 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 LDLRAD4O15165 306 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 XRCC3O43542 346 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 MPGP29372 298 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 INPP1P49441 399 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 SPOCK1Q08629 439 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 GUSBP1Q15486 140 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 PLXDC2Q6UX71 529 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 UTS2BQ765I0 119 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 P4HA3Q7Z4N8 544 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 NAA40Q86UY6 237 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 COMMD2Q86X83 199 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 PP6455Q8WZ26 134 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 WNT2BQ93097 391 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 LYZL4Q96KX0 146 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 TAAR6Q96RI8 345 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 PLEKHA1Q9HB21 404 aa15.59■□□□□ 0.09
RAB39A-201ENST00000320578 RBFOX1Q9NWB1 397 aaKnown RBP15.59■□□□□ 0.09
RAB39A-201ENST00000320578 A0A0A6YYH2 397 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 A6NIN4 97 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 A6NJ64 397 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 E9PLN8 166 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 IGHV3-9P01782 118 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 ADRB1P08588 477 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 DBHP09172 617 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 SPNP16150 400 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 RAB6AP20340 208 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 ARR3P36575 388 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 HTR5AP47898 357 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 PTH2RP49190 550 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 SF3B4Q15427 424 aaKnown RBP eCLIP15.58■□□□□ 0.08
RAB39A-201ENST00000320578 FGFBP3Q8TAT2 258 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 YIPF5Q969M3 257 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 FAM71F1Q96KD3 344 aaPredicted RBP15.58■□□□□ 0.08
RAB39A-201ENST00000320578 ZNF224Q9NZL3 707 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 FBLN5Q9UBX5 448 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 DNAJC13O75165 2243 aa15.58■□□□□ 0.08
RAB39A-201ENST00000320578 MKRN2OSH3BPM6 223 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 GABARAPH6UMI1 98 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 CNOT4O95628 575 aaKnown RBP15.57■□□□□ 0.08
RAB39A-201ENST00000320578 GABRA1P14867 456 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 ARSBP15848 533 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 MAP2K3P46734 347 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 MADCAM1Q13477 382 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 TMEM69Q5SWH9 247 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 DNM1P46Q6ZS02 220 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 DUSP18Q8NEJ0 188 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 AKR7LQ8NHP1 331 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 SLC7A6Q92536 515 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 SGK3Q96BR1 496 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 ITPKCQ96DU7 683 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 C7orf50Q9BRJ6 194 aaKnown RBP15.57■□□□□ 0.08
RAB39A-201ENST00000320578 DIABLOQ9NR28 239 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 N6AMT1Q9Y5N5 214 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 TMEM272A0A1B0GTI8 110 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 LYRM1O43325 122 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 CRYABP02511 175 aaKnown RBP15.57■□□□□ 0.08
RAB39A-201ENST00000320578 ANOS1P23352 680 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 CDK2P24941 298 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 FAPQ12884 760 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 PABPC1L2AQ5JQF8 200 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 COLCA1Q6ZS62 124 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 SPACA3Q8IXA5 215 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 OR5AS1Q8N127 324 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 UBE2J2Q8N2K1 259 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 JAGN1Q8N5M9 183 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 RBMXL3Q8N7X1 1067 aaKnown RBP15.57■□□□□ 0.08
RAB39A-201ENST00000320578 SSC4DQ8WTU2 575 aa15.57■□□□□ 0.08
RAB39A-201ENST00000320578 EEF1E1O43324 174 aaKnown RBP15.56■□□□□ 0.08
RAB39A-201ENST00000320578 CTAG2O75638 210 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 BPNT1O95861 308 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 PRF1P14222 555 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 ABOP16442 354 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 SPINK2P20155 84 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 OR2A2Q6IF42 318 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 OR52N4Q8NGI2 321 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 OR13C9Q8NGT0 318 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 ZFP3Q96NJ6 502 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 SOX7Q9BT81 388 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 C1QTNF5Q9BXJ0 243 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms