RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 BLOC1S1P78537 153 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 MST1LQ2TV78 715 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 NKAPLQ5M9Q1 402 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 SPAG16Q8N0X2 631 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 NPIPA1Q9UND3 350 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 GPR132Q9UNW8 380 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 SYT7O43581 403 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 PVALBP20472 110 aaPredicted RBP16.98■□□□□ 0.31
RTN4-201ENST00000317610 PGAP1Q75T13 922 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 RTN4RL2Q86UN3 420 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 CBLN2Q8IUK8 224 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 DAZLQ92904 295 aaKnown RBP16.98■□□□□ 0.31
RTN4-201ENST00000317610 TMEM230Q96A57 120 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 ADAT1Q9BUB4 502 aaKnown RBP16.98■□□□□ 0.31
RTN4-201ENST00000317610 SEC11CQ9BY50 192 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 PBOV1Q9GZY1 135 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 TLNRD1Q9H1K6 362 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 RAB18Q9NP72 206 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 MMP17Q9ULZ9 603 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 UNC80Q8N2C7 3258 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 SFT2D2O95562 160 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 GSTP1P09211 210 aaKnown RBP16.97■□□□□ 0.31
RTN4-201ENST00000317610 RFC3P40938 356 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 GPR85P60893 370 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 HYAL1Q12794 435 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 ACTBL2Q562R1 376 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 PTCRAQ6ISU1 281 aaPredicted RBP16.97■□□□□ 0.31
RTN4-201ENST00000317610 TMPPEQ6ZT21 453 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 ARRDC1Q8N5I2 433 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 OR5D14Q8NGL3 314 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 OR1N1Q8NGS0 311 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 TMED6Q8WW62 240 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 SLAMF6Q96DU3 332 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 MVB12AQ96EY5 273 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 KLHDC7BQ96G42 594 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.97■□□□□ 0.31
RTN4-201ENST00000317610 FOXQ1Q9C009 403 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 LPAR5Q9H1C0 372 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 SLCO1B1Q9Y6L6 691 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 PCP4L1A6NKN8 68 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 SNAPINO95295 136 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 PJVKQ0ZLH3 352 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 SGCAQ16586 387 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 ZNF528Q3MIS6 628 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 AWAT2Q6E213 333 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 H3F3CQ6NXT2 135 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 PRSS54Q6PEW0 395 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 H1FNTQ75WM6 255 aaPredicted RBP16.97■□□□□ 0.31
RTN4-201ENST00000317610 SLC29A4Q7RTT9 530 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 ANGPTL5Q86XS5 388 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 OR2I1PQ8NGU4 316 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 MFSD8Q8NHS3 518 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 C5orf66Q9H5L9 145 aa16.97■□□□□ 0.31
RTN4-201ENST00000317610 A0A0A6YYD4 124 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 RAB13P51153 203 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 EMP2P54851 167 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 KLHL24Q6TFL4 600 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 TMEM234Q8WY98 164 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 C11orf40Q8WZ69 217 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 RELTQ969Z4 430 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 AQP10Q96PS8 301 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 NICN1Q9BSH3 213 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 KLHL13Q9P2N7 655 aa16.96■□□□□ 0.31
RTN4-201ENST00000317610 HEXAP06865 529 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 ZNF93P35789 620 aaPredicted RBP16.96■□□□□ 0.3
RTN4-201ENST00000317610 OR10S1Q8NGN2 331 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 OR13C9Q8NGT0 318 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 ACKR4Q9NPB9 350 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 UQCC1Q9NVA1 299 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 COPS7AQ9UBW8 275 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 LPAR3Q9UBY5 353 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 FLVCR1Q9Y5Y0 555 aa16.96■□□□□ 0.3
RTN4-201ENST00000317610 EPOPA6NHQ4 379 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 FOXK1P85037 733 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 HSF1Q00613 529 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 PLAC9Q5JTB6 97 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 FBXO46Q6PJ61 603 aaPredicted RBP16.95■□□□□ 0.3
RTN4-201ENST00000317610 PEG10Q86TG7 708 aaKnown RBP16.95■□□□□ 0.3
RTN4-201ENST00000317610 NAA40Q86UY6 237 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 NUBPLQ8TB37 319 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 C1orf147Q96MC9 270 aaPredicted RBP16.95■□□□□ 0.3
RTN4-201ENST00000317610 PCDH15Q96QU1 1955 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 PHF3Q92576 2039 aaKnown RBP16.95■□□□□ 0.3
RTN4-201ENST00000317610 PQLC2LA1A4F0 135 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 MSGN1A6NI15 193 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 CLEC18BQ6UXF7 455 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 COX15Q7KZN9 410 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 MISPQ8IVT2 679 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 DMBX1Q8NFW5 382 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 ST8SIA1Q92185 356 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 WNT2BQ93097 391 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 SAT2Q96F10 170 aaPredicted RBP16.95■□□□□ 0.3
RTN4-201ENST00000317610 ARL5BQ96KC2 179 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 CTSFQ9UBX1 484 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 CYP8B1Q9UNU6 501 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 SRPK3Q9UPE1 567 aa16.95■□□□□ 0.3
RTN4-201ENST00000317610 RP1P56715 2156 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 A0A1W2PPC4 97 aa16.94■□□□□ 0.3
RTN4-201ENST00000317610 HIST1H1DP16402 221 aaKnown RBP16.94■□□□□ 0.3
RTN4-201ENST00000317610 ABOP16442 354 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms