RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 LIN7CQ9NUP9 197 aaKnown RBP7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 GAR1Q9NY12 217 aaKnown RBP7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 FBXL4Q9UKA2 621 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 SSTR4P31391 388 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 FOXA1P55317 472 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 GFERP55789 205 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 KCNAB1Q14722 419 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC35D2Q76EJ3 337 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 OSGIN2Q9Y236 505 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 TCRBV3S1A0A5B6 114 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 DNASE2O00115 360 aaPredicted RBP7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 SIAH2O43255 324 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 FBXO24O75426 580 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 RAF1P04049 648 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 OR5G3P0C626 314 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 SMIM21Q3B7S5 101 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 BTNL8Q6UX41 500 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 RFLNAQ6ZTI6 216 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 ENTHD1Q8IYW4 607 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 OR13C8Q8NGS7 320 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF251Q9BRH9 671 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 MFRPQ9BY79 579 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 PLK3Q9H4B4 646 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 AAMDCQ9H7C9 122 aa7.56□□□□□ -1.2
PCDHB1-201ENST00000306549 A0A1B0GWA3 101 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 FRS3O43559 492 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 OR1C1Q15619 314 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 RPL7L1Q6DKI1 246 aaKnown RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 DEFB127Q9H1M4 99 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 GYPBP06028 91 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CNR1P21554 472 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 BSGP35613 385 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 DOK3Q7L591 496 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 BHLHA9Q7RTU4 235 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 GALNT16Q8N428 558 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CIB3Q96Q77 187 aaPredicted RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 OR2M2Q96R28 347 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 SIAEQ9HAT2 523 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CRLF2Q9HC73 371 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 SIRT5Q9NXA8 310 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 FAM208BQ5VWN6 2430 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 MEIOCA2RUB1 952 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 TNFRSF1BP20333 461 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 LIPAP38571 399 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC36A1Q7Z2H8 476 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 C16orf52Q8NHV5 167 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 FOXN4Q96NZ1 517 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 ACOXLQ9NUZ1 547 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 A0A0A6YYD5 115 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 HRO43593 1189 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 PEX11BO96011 259 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 GIPRP48546 466 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 PGGT1BP53609 377 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 RPL27P61353 136 aaKnown RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 TESK1Q15569 626 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CMPK2Q5EBM0 449 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 SOHLH1Q5JUK2 328 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 OR8G2PQ6IF36 304 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 VRK2Q86Y07 508 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC35D1Q9NTN3 355 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 PILRBQ9UKJ0 227 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CREBBPQ92793 2442 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 HS3ST1O14792 307 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 APEX1P27695 318 aaKnown RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 SRD5A2P31213 254 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM108Q6UXF1 575 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 APOOLQ6UXV4 268 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 LHFPL2Q6ZUX7 228 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CCDC71Q8IV32 467 aaPredicted RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 ARPC5LQ9BPX5 153 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 RPP25Q9BUL9 199 aaKnown RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CXorf36Q9H7Y0 433 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 CYSLTR2Q9NS75 346 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 PURGQ9UJV8 347 aaKnown RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 RNF150Q9ULK6 438 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 RAB27BO00194 218 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 BHLHE40O14503 412 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 MBP02144 154 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 MLLT11Q13015 90 aaPredicted RBP7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 PLXDC2Q6UX71 529 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 MDGA2Q7Z553 956 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 OR2L13Q8N349 312 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 OR2V1Q8NHB1 315 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 GALNT9Q9HCQ5 603 aa7.55□□□□□ -1.2
PCDHB1-201ENST00000306549 DBX1A6NMT0 343 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TCAPO15273 167 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 OR2J2O76002 312 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 C21orf58P58505 322 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 EGR3Q06889 387 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ACER2Q5QJU3 275 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TIGD3Q6B0B8 471 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 FCRLAQ7L513 359 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SEH1LQ96EE3 360 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SORBS1Q9BX66 1292 aaKnown RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 PAPLNO95428 1278 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 CHRM2P08172 466 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 LIPCP11150 499 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 HTR1FP30939 366 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 RBP2P50120 134 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 RGS7BPQ6MZT1 257 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms