RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 SH3BGRL2Q9UJC5 107 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 FOXJ3Q9UPW0 622 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 V9GY05 133 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 CGAP01215 116 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 GLI4P10075 376 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 COX5BP10606 129 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF20P17024 532 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 ATF1P18846 271 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 THBS2P35442 1172 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
CCDC7-202ENST00000302316 PPP3R1P63098 170 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 PLP2Q04941 152 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 DYNC1I2Q13409 638 aaKnown RBP11.31□□□□□ -0.6
CCDC7-202ENST00000302316 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
CCDC7-202ENST00000302316 SPANXN2Q5MJ10 180 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 GABRG1Q8N1C3 465 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF610Q8N9Z0 462 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 DNAAF1Q8NEP3 725 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 OR1J2Q8NGS2 313 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 SFXN3Q9BWM7 321 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 MIXL1Q9H2W2 232 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 ZCCHC4Q9H5U6 513 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 SP140LQ9H930 580 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 PLEKHA1Q9HB21 404 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 PLGRKTQ9HBL7 147 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF835Q9Y2P0 537 aa11.31□□□□□ -0.6
CCDC7-202ENST00000302316 A6NIN4 97 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 IGLV3-1P01715 115 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 EDN3P14138 238 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 CCNOP22674 350 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 STOMP27105 288 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 HOXC12P31275 282 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 CEACAM8P31997 349 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-202ENST00000302316 TNFSF8P32971 234 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 GNALP38405 381 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 GABRA6Q16445 453 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 HES5Q5TA89 166 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 MDP1Q86V88 176 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 PARP16Q8N5Y8 322 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 BORCS5Q969J3 196 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 ADAT3Q96EY9 351 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-202ENST00000302316 LYZL4Q96KX0 146 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 LOC100509620A0A075B734 347 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 C5orf49A4QMS7 147 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 IFITM5A6NNB3 132 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 AIPO00170 330 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 HPGDSO60760 199 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 PAHP00439 452 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 SFTPCP11686 197 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 CCL2P13500 99 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF12P17014 697 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 IGFBP3P17936 291 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-202ENST00000302316 BEND4Q6ZU67 534 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 CXorf67Q86X51 503 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-202ENST00000302316 SERPINA12Q8IW75 414 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 CCDC36Q8IYA8 594 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 C1orf162Q8NEQ5 155 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-202ENST00000302316 OR2AE1Q8NHA4 323 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF671Q8TAW3 534 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 TRMT10AQ8TBZ6 339 aaKnown RBP11.3□□□□□ -0.6
CCDC7-202ENST00000302316 B3GNT2Q9NY97 397 aa11.3□□□□□ -0.6
CCDC7-202ENST00000302316 A0A0B4J203 849 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 A0A1W2PR80 420 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 DHRS3O75911 302 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 ETV6P41212 452 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 PSMD7P51665 324 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 PMPCAQ10713 525 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 PLPP7Q8NBV4 271 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 OR51A2Q8NGJ7 313 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 OR14K1Q8NGZ2 314 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 REEP6Q96HR9 211 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 ABRACLQ9P1F3 81 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 ADAM30Q9UKF2 790 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
CCDC7-202ENST00000302316 APLNRP35414 380 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF45Q02386 682 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 SPOCK1Q08629 439 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 LY6DQ14210 128 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 P2RY6Q15077 328 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 OR5D14Q8NGL3 314 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 DIRAS2Q96HU8 199 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 C1QTNF5Q9BXJ0 243 aa11.29□□□□□ -0.6
CCDC7-202ENST00000302316 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
CCDC7-202ENST00000302316 MTRF1O75570 445 aaKnown RBP11.28□□□□□ -0.6
CCDC7-202ENST00000302316 CLDN12P56749 244 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 GLYATL3Q5SZD4 288 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 C16orf87Q6PH81 154 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 SAMD12Q8N8I0 201 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 CCDC54Q8NEL0 328 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 OR13C9Q8NGT0 318 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 LGALS14Q8TCE9 139 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 LIN7BQ9HAP6 207 aa11.28□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF391Q9UJN7 358 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms