RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CENPMQ9NSP4 180 aa11.63□□□□□ -0.55
TVP23A-201ENST00000299866 TREM2Q9NZC2 230 aa11.63□□□□□ -0.55
TVP23A-201ENST00000299866 FBXL17Q9UF56 701 aa11.63□□□□□ -0.55
TVP23A-201ENST00000299866 SDCBPO00560 298 aaPredicted RBP11.62□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF354AO60765 605 aaPredicted RBP11.62□□□□□ -0.55
TVP23A-201ENST00000299866 IFNA17P01571 189 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 SELLP14151 372 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CTLA4P16410 223 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 S100A2P29034 98 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 PPM1AP35813 382 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 IGFALSP35858 605 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 ACTR1BP42025 376 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FHITP49789 147 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 SSTP61278 116 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 EMC4Q5J8M3 183 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF101Q8IZC7 436 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 OR14C36Q8NHC7 312 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 ST7LQ8TDW4 575 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 S100PBPQ96BU1 408 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 TAAR9Q96RI9 348 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CCDC3Q9BQI4 270 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 PIGQQ9BRB3 760 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FBXO7Q9Y3I1 522 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 A0A1W2PQU0 124 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 HSPB2A8KAH6 182 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 C17orf51A8MQB3 221 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 HCRTR1O43613 425 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FOXS1O43638 330 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 SLC34A2O95436 690 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 VSIG8P0DPA2 414 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 HKR1P10072 659 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 GLRA1P23415 457 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
TVP23A-201ENST00000299866 SP3Q02447 781 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 HMGN3Q15651 99 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 HSPB2Q16082 182 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 ACTBL2Q562R1 376 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 C1orf100Q5SVJ3 147 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 OR9K2Q8NGE7 335 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 C16orf52Q8NHV5 167 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FLVCR1-AS1Q8TAF5 88 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 APOOQ9BUR5 198 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 UFSP2Q9NUQ7 469 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FREM3P0C091 2139 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 METTL12A8MUP2 240 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 TGFBR3LH3BV60 316 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CST4P01036 141 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 KNG1P01042 644 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FSTP19883 344 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 MPZP25189 248 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FCGR2CP31995 323 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 Q3ZCU0 254 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 FAM160A2Q8N612 972 aaPredicted RBP11.62□□□□□ -0.55
TVP23A-201ENST00000299866 TMEM104Q8NE00 496 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 OR52A1Q9UKL2 312 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 MMP24Q9Y5R2 645 aa11.62□□□□□ -0.55
TVP23A-201ENST00000299866 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
TVP23A-201ENST00000299866 K7EPK0 472 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 SCGB1D2O95969 90 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 ITGA3P26006 1051 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 EMP2P54851 167 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
TVP23A-201ENST00000299866 ACKR1Q16570 336 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 SSX9Q7RTT3 188 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 RNF144BQ7Z419 303 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 FAM71E2Q8N5Q1 922 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 MAFIPQ8WZ33 124 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 TSACCQ96A04 125 aaPredicted RBP11.61□□□□□ -0.55
TVP23A-201ENST00000299866 C8orf44Q96CB5 159 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 MEGF10Q96KG7 1140 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 OR2M4Q96R27 311 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
TVP23A-201ENST00000299866 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 TMEM269A0A1B0GVZ9 245 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 C1QL1O75973 258 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 PET100P0DJ07 73 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 BTG2P78543 158 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 INSM1Q01101 510 aaPredicted RBP11.61□□□□□ -0.55
TVP23A-201ENST00000299866 KIR2DS3Q14952 304 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 POC1AQ8NBT0 407 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 MARS2Q96GW9 593 aaKnown RBP11.61□□□□□ -0.55
TVP23A-201ENST00000299866 COA3Q9Y2R0 106 aaPredicted RBP11.61□□□□□ -0.55
TVP23A-201ENST00000299866 PRSS37A4D1T9 235 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 OR2C1O95371 312 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 NUDT14O95848 222 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 MPIG6BO95866 241 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 NSUN5P2Q63ZY6 315 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 MED25Q71SY5 747 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 KDM8Q8N371 416 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms