RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CFIP05156 583 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 DOCK3Q8IZD9 2030 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 LNP1A1A4G5 178 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 KLK3P07288 261 aaPredicted RBP10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 FABP2P12104 132 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 SELPP16109 830 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 UMODL1-AS1Q8N2C9 162 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 PELI3Q8N2H9 469 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 ISG20L2Q9H9L3 353 aaKnown RBP10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 TREX1Q9NSU2 369 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 ERVH48-1M5A8F1 160 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 PPM1DO15297 605 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 OR5G3P0C626 314 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 EPHA2P29317 976 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 OPRM1P35372 400 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 GNB1P62873 340 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 PLEKHF2Q9H8W4 249 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 LOC107986453A0A1B0GWG9 222 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 SCGB1A1P11684 91 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC5A10A0PJK1 596 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 FAM221AA4D161 298 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 RTN4RL1Q86UN2 441 aaPredicted RBP10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 OR1L6Q8NGR2 347 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 SEH1LQ96EE3 360 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 A4GALTQ9NPC4 353 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 AMDHD2Q9Y303 409 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 KMT2EQ8IZD2 1858 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 DUXBA0A1W2PPF3 345 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 HTR5AP47898 357 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 OR2M3Q8NG83 312 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 PTP4A1Q93096 173 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 XAF1Q6GPH4 301 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 TFAP2EQ6VUC0 442 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 DERL3Q96Q80 235 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 RGPD2P0DJD1 1756 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 NUP98P52948 1817 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 WDR1O75083 606 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 FBXO46Q6PJ61 603 aaPredicted RBP10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 FAM71CQ8NEG0 241 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 ADGRL4Q9HBW9 690 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 DNMT3BQ9UBC3 853 aaKnown RBP10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 TACR1P25103 407 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 SPINT3P49223 89 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 OR5AU1Q8NGC0 362 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 GPR150Q8NGU9 434 aa10.73□□□□□ -0.69
SHROOM3-201ENST00000296043 RGPD8O14715 1765 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 GLB1P16278 677 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 LANCL3Q6ZV70 420 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 CNTN4Q8IWV2 1026 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 ACOT4Q8N9L9 421 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 RNF208Q9H0X6 261 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 OLFM2O95897 454 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MDKP21741 143 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 HTR1DP28221 377 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 EMP1P54849 157 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 TCL1AP56279 114 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 HES1Q14469 280 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 HLA-BQ31612 363 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC38A9Q8NBW4 561 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 KREMEN2Q8NCW0 462 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 OR4S1Q8NGB4 309 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MFSD2BA6NFX1 497 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 ISLRO14498 428 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 HS3ST1O14792 307 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 CLEC14AQ86T13 490 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MAP1LC3B2A6NCE7 125 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 GJB3O75712 270 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 TNFSF4P23510 183 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 GCH1P30793 250 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 OR1D4P47884 311 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 UBE2V2Q15819 145 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 OR4C12Q96R67 309 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MAP1LC3BQ9GZQ8 125 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 CDC14CA4D256 554 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 CPMP14384 443 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 GJA4P35212 333 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 FOXK1P85037 733 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 FKBP1CQ5VVH2 108 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MRM1Q6IN84 353 aaKnown RBP10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC35E1Q96K37 410 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 LINC00862A6NCI5 91 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 H3BP45 60 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 GLRA1P23415 457 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 TAS2R45P59539 299 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 HLA-DRB5Q30154 266 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 DPY19L2P2Q6ZN68 376 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 GKN2Q86XP6 184 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 OR10A7Q8NGE5 316 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 PRSS21Q9Y6M0 314 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MCM3APO60318 1980 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 CHRM2P08172 466 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 KCNJ10P78508 379 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 TBXA2RP21731 343 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
SHROOM3-201ENST00000296043 MEOX1P50221 254 aa10.71□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF775Q96BV0 537 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms