RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZFP41Q8N8Y5 198 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF485Q8NCK3 441 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
CCDC140-201ENST00000295226 CRIM1Q9NZV1 1036 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 DPRXA6NFQ7 191 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 PRSS44E7EML9 344 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 CALCRP30988 508 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
CCDC140-201ENST00000295226 SLC6A9P48067 706 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 CX3CR1P49238 355 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 GDI2P50395 445 aaKnown RBP13.12□□□□□ -0.31
CCDC140-201ENST00000295226 KCTD7Q96MP8 289 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 KCNJ15Q99712 375 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 DAPK2Q9UIK4 370 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 GTF2A1LQ9UNN4 478 aa13.12□□□□□ -0.31
CCDC140-201ENST00000295226 SIRT4Q9Y6E7 314 aaPredicted RBP13.12□□□□□ -0.31
CCDC140-201ENST00000295226 TRDV1A0A1B0GX56 115 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 M0R135 149 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 UPK1BO75841 260 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 MT-ND5P03915 603 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ACSM4P0C7M7 580 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 CD53P19397 219 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 WNT5AP41221 380 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ACTA2P62736 377 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 GRB2P62993 217 aaKnown RBP13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ACTG2P63267 376 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ECH1Q13011 328 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 KRTAP27-1Q3LI81 207 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 CD200R1LQ6Q8B3 271 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 DEGS2Q6QHC5 323 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 FAM220AQ7Z4H9 259 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 SPTSSAQ969W0 71 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF799Q96GE5 643 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 SLC22A13Q9Y226 551 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 ICE1Q9Y2F5 2266 aa13.11□□□□□ -0.31
CCDC140-201ENST00000295226 GCN1Q92616 2671 aaKnown RBP13.1□□□□□ -0.31
CCDC140-201ENST00000295226 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 IGHV2OR16-5A0A0B4J2B6 119 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 TMEM269A0A1B0GVZ9 245 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 SIAH2O43255 324 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF254O75437 659 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
CCDC140-201ENST00000295226 NGFP01138 241 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 HLA-DPB1P04440 258 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 TACSTD2P09758 323 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 COX5BP10606 129 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 CD40P25942 277 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 OTX1P32242 354 aaPredicted RBP13.1□□□□□ -0.31
CCDC140-201ENST00000295226 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
CCDC140-201ENST00000295226 NAAAQ02083 359 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 TBC1D28Q2M2D7 210 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 DMRTC2Q8IXT2 367 aaPredicted RBP13.1□□□□□ -0.31
CCDC140-201ENST00000295226 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 FAM169BQ8N8A8 192 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 AP3S1Q92572 193 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 CCDC32Q9BV29 185 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 RNF167Q9H6Y7 350 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 BABAM2Q9NXR7 383 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 ROS1P08922 2347 aa13.1□□□□□ -0.31
CCDC140-201ENST00000295226 H3BSH0 61 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 LCATP04180 440 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 ANXA2P07355 339 aaKnown RBP13.09□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF35P13682 527 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 IGFBP2P18065 325 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 TPTEP56180 551 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 TRAM1Q15629 374 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 MEX3BQ6ZN04 569 aaKnown RBP13.09□□□□□ -0.31
CCDC140-201ENST00000295226 RHOUQ7L0Q8 258 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 KCTD20Q7Z5Y7 419 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 CCDC190Q86UF4 302 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 ZNF101Q8IZC7 436 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 PRSS35Q8N3Z0 413 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 SLC25A46Q96AG3 418 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
CCDC140-201ENST00000295226 PLPPR2Q96GM1 343 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 C4orf45Q96LM5 186 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 SP140LQ9H930 580 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 FAM206AQ9NX38 181 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 SF3B6Q9Y3B4 125 aaKnown RBP13.09□□□□□ -0.31
CCDC140-201ENST00000295226 R4GMQ9 66 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 PKDREJQ9NTG1 2253 aa13.09□□□□□ -0.31
CCDC140-201ENST00000295226 FASNP49327 2511 aaKnown RBP13.09□□□□□ -0.31
CCDC140-201ENST00000295226 CASKO14936 926 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 RPS19P39019 145 aaKnown RBP13.08□□□□□ -0.31
CCDC140-201ENST00000295226 GBX2P52951 348 aaPredicted RBP13.08□□□□□ -0.31
CCDC140-201ENST00000295226 PRSS12P56730 875 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 TAS2R43P59537 309 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 PRSS45Q7RTY3 260 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms