RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 OVCH1Q7RTY7 1134 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TSEN54Q7Z6J9 526 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 BPHLQ86WA6 291 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 HSD17B11Q8NBQ5 300 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 NPEPL1Q8NDH3 523 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 OR4D10Q8NGI6 311 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 OR52N5Q8NH56 324 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PSMF1Q92530 271 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 REEP6Q96HR9 211 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PIGQQ9BRB3 760 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 BOKQ9UMX3 212 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 PPP1R3CQ9UQK1 317 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 LOXL2Q9Y4K0 774 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 MTCH2Q9Y6C9 303 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 C5orf67F2Z3F1 127 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PLA2G10O15496 165 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SEMA7AO75326 666 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TSPAN15O95858 294 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PDGFAP04085 211 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TRAPPC2P0DI81 140 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TRAPPC2BP0DI82 140 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ADH6P28332 368 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SERPINF1P36955 418 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SELENOPP49908 381 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PPT1P50897 306 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 EFNB2P52799 333 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 CLDN15P56746 228 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZXDAP98168 799 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 COTL1Q14019 142 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SSX2Q16385 188 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SHEQ5VZ18 495 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SLC22A25Q6T423 547 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TMEM91Q6ZNR0 172 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ANKRD37Q7Z713 158 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 CMIPQ8IY22 773 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 DND1Q8IYX4 353 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 CHAC2Q8WUX2 184 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 DYRK2Q92630 601 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TREM2Q9NZC2 230 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 GLTPQ9NZD2 209 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 MRM2Q9UI43 246 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 TRAPPC2LQ9UL33 140 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 EDARQ9UNE0 448 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 WIF1Q9Y5W5 379 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 GPR179Q6PRD1 2367 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 DENND4AQ7Z401 1863 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 M0R135 149 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 APOC1P02654 83 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SERPINE2P07093 398 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ADRB1P08588 477 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 NANOS3P60323 173 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 CAMK2BQ13554 666 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 EXOSC2Q13868 293 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 RNLSQ5VYX0 342 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TMPRSS7Q7RTY8 843 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZNF687Q8N1G0 1237 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZSCAN4Q8NAM6 433 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 OR51F2Q8NH61 342 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZFAND1Q8TCF1 268 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZNF799Q96GE5 643 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 UCN2Q96RP3 112 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZNF2Q9BSG1 426 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 JAM3Q9BX67 310 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 MAGT1Q9H0U3 335 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 METTL9Q9H1A3 318 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 S1PR5Q9H228 398 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 KCND3Q9UK17 655 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ELF5Q9UKW6 265 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 ACACAQ13085 2346 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SERTM1A2A2V5 107 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 GPR171O14626 319 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TOR1AO14656 332 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 MT-ATP6P00846 226 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ITGB2P05107 769 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 LPLP06858 475 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 GPM6AP51674 278 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SSTP61278 116 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TAGLNQ01995 201 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 C9orf40Q8IXQ3 194 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 OTOSQ8NHW6 89 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 STK35Q8TDR2 534 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ABHD5Q8WTS1 349 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 FBLIM1Q8WUP2 373 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SDHCQ99643 169 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 TRAPPC4Q9Y296 219 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 THSD7BQ9C0I4 1608 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 BORCS7-ASMTA0A0B4J1R7 106 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 XRCC2O43543 280 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TIMM8AO60220 97 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 EIF4E2O60573 245 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 MECP2P51608 486 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 RRADP55042 308 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 MEF2DQ14814 521 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SIGIRRQ6IA17 410 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 C6orf15Q6UXA7 325 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 PGAP1Q75T13 922 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SSX9Q7RTT3 188 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms