RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 HOXC4P09017 264 aaPredicted RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 SLC35E2P0CK97 266 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 CD38P28907 300 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RABIFP47224 123 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 F2RL1P55085 397 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 YPEL5P62699 121 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 SSBP1Q04837 148 aaKnown RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 ADGRE4PQ86SQ3 457 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 SLC30A7Q8NEW0 376 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 MARCH1Q8TCQ1 289 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RNF141Q8WVD5 230 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 TMEM41AQ96HV5 264 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 CLCC1Q96S66 551 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 NAA11Q9BSU3 229 aaPredicted RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 SEC11CQ9BY50 192 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RTN4RQ9BZR6 473 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RHOFQ9HBH0 211 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RCC2Q9P258 522 aaKnown RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 R4GN57 208 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 A0A1B0GV90 55 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RCC1P18754 421 aaPredicted RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 CFPP27918 469 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 CSNK1EP49674 416 aaKnown RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 P2RY4P51582 365 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 PJVKQ0ZLH3 352 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 LPAL2Q16609 132 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 ALG11Q2TAA5 492 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 RNF144BQ7Z419 303 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 OR51F2Q8NH61 342 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 STOML3Q8TAV4 291 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 PMM1Q92871 262 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 C14orf79Q96F83 325 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 FAM60AQ9NP50 221 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 SLC17A5Q9NRA2 495 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 MMP26Q9NRE1 261 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 METTL1Q9UBP6 276 aaKnown RBP10.13□□□□□ -0.79
SCLT1-201ENST00000281142 PCDHGA1Q9Y5H4 931 aa10.13□□□□□ -0.79
SCLT1-201ENST00000281142 TDRD6O60522 2096 aaKnown RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 TEX13DA0A0J9YY54 714 aaPredicted RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 LDLRAD4O15165 306 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 TNFSF14O43557 240 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 RENP00797 406 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 SFTA3P0C7M3 94 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 OR8U8P0C7N1 319 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 GNB3P16520 340 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 MAOAP21397 527 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 LPAR6P43657 344 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 SLC9A3R2Q15599 337 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF585AQ6P3V2 769 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 METTL27Q8N6F8 245 aaPredicted RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 WDSUB1Q8N9V3 476 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF563Q8TA94 476 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 GTF3AQ92664 365 aaKnown RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF775Q96BV0 537 aaPredicted RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 KLHDC7BQ96G42 594 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 Q9N2J8 555 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 PILRBQ9UKJ0 227 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 MRPS33Q9Y291 106 aaKnown RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 ADAMTS9Q9P2N4 1935 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 SPTY2D1-AS1A0A0U1RR47 76 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 BCAT2O15382 392 aaPredicted RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 SLC16A7O60669 478 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 HLA-GP17693 338 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 IGFBP3P17936 291 aaPredicted RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 NME2P22392 152 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 FZD2Q14332 565 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 KIR2DS3Q14952 304 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF542PQ5EBM4 170 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 RNF128Q8TEB7 428 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 SLC25A36Q96CQ1 311 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 WDR92Q96MX6 357 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 PARP12Q9H0J9 701 aaKnown RBP10.12□□□□□ -0.79
SCLT1-201ENST00000281142 EMC9Q9Y3B6 208 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 LRP12Q9Y561 859 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 DMRT1Q9Y5R6 373 aa10.12□□□□□ -0.79
SCLT1-201ENST00000281142 RAB27BO00194 218 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 SERPINA5P05154 406 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 TACR3P29371 465 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 NUBP1P53384 320 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 TOMM34Q15785 309 aaPredicted RBP10.11□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF260Q3ZCT1 412 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 PARGQ86W56 976 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF679Q8IYX0 411 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 ZNF321PQ8N8H1 164 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 HIST1H2BAQ96A08 127 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 SLC22A18Q96BI1 424 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 SCARF2Q96GP6 870 aaPredicted RBP10.11□□□□□ -0.79
SCLT1-201ENST00000281142 EGLN1Q9GZT9 426 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 GDF2Q9UK05 429 aaPredicted RBP10.11□□□□□ -0.79
SCLT1-201ENST00000281142 SLC5A6Q9Y289 635 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 PI4KAP42356 2102 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 TXNDC12O95881 172 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 DAOP14920 347 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 CTLA4P16410 223 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 ADH6P28332 368 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 CD80P33681 288 aa10.11□□□□□ -0.79
SCLT1-201ENST00000281142 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
SCLT1-201ENST00000281142 RAB38P57729 211 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms