RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 F8VWA3 439 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 H0Y8X5 98 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 P2RX6O15547 441 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 TLX1P31314 330 aaPredicted RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 NKX6-1P78426 367 aaPredicted RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 HAGHQ16775 308 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 ANKRD55Q3KP44 614 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 CLEC18BQ6UXF7 455 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 RNF144BQ7Z419 303 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 DEFB119Q8N690 84 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 LPAR4Q99677 370 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 NICN1Q9BSH3 213 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 MRI1Q9BV20 369 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 NELFAQ9H3P2 528 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 PHPT1Q9NRX4 125 aaPredicted RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 SCAF4O95104 1147 aaKnown RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 NUDT14O95848 222 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 CD5P06127 495 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 ACAA2P42765 397 aaKnown RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 CSNK1EP49674 416 aaKnown RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 LSM6P62312 80 aaKnown RBP11.48□□□□□ -0.57
HERC6-202ENST00000273960 ZP2Q05996 745 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 ALG11Q2TAA5 492 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 AKR1C8PQ5T2L2 129 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 OR2T2Q6IF00 324 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 GKN2Q86XP6 184 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 OR4C3Q8NH37 302 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 S100A13Q99584 98 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 NUDT9Q9BW91 350 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 SH3BGRL3Q9H299 93 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 PDE7BQ9NP56 450 aa11.48□□□□□ -0.57
HERC6-202ENST00000273960 TRBV5-5A0A0J9YX44 114 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 TMEM212A6NML5 194 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 K7EPK0 472 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 DIRAS3O95661 229 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 F10P00742 488 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 TAGLN2P37802 199 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 TAS2R60P59551 318 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 CDK3Q00526 305 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 TMEM184AQ6ZMB5 413 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 DPY19L2P2Q6ZN68 376 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 FAM71E2Q8N5Q1 922 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 OR9K2Q8NGE7 335 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 TSACCQ96A04 125 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 KLHDC3Q9BQ90 382 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 ZNF700Q9H0M5 742 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 CA14Q9ULX7 337 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 TIMM10BQ9Y5J6 103 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 MTCL1Q9Y4B5 1905 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 EML5Q05BV3 1969 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 P2RY10O00398 339 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 IGKV1D-16P01601 117 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 THBS1P07996 1170 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 HOXB2P14652 356 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 ALOX5APP20292 161 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 PPP1CCP36873 323 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 STARD6P59095 220 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 BIKQ13323 160 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 ARFRP1Q13795 201 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 ENPP2Q13822 863 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 IAH1Q2TAA2 248 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 SOHLH1Q5JUK2 328 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 METRNLQ641Q3 311 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 ZNF514Q96K75 400 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 SLC17A9Q9BYT1 436 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 CNTNAP3Q9BZ76 1288 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 CHST5Q9GZS9 411 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 FBXL21Q9UKT6 434 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 SLC16A7O60669 478 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 DUS4LO95620 317 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 CXCL1P09341 107 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 HOXA5P20719 270 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 RPL12P30050 165 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 TMEM33P57088 247 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 C1QL3Q5VWW1 255 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 OR5D18Q8NGL1 313 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 LCN9Q8WX39 176 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 EDAQ92838 391 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 MENTQ9BUN1 341 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
HERC6-202ENST00000273960 GDF2Q9UK05 429 aaPredicted RBP11.47□□□□□ -0.57
HERC6-202ENST00000273960 TICRRQ7Z2Z1 1910 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 A0A1W2PP11 408 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 MPIG6BO95866 241 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 THEGLP0DJG4 465 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 TACR3P29371 465 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 REC114Q7Z4M0 266 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 ADGRE4PQ86SQ3 457 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 PHOSPHO2Q8TCD6 241 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 NPRL2Q8WTW4 380 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms