RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 GUCA1AP43080 201 aaPredicted RBP14.74□□□□□ -0.05
VPS54-201ENST00000272322 GABREP78334 506 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 CDCP2Q5VXM1 449 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 RNF133Q8WVZ7 376 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 C17orf50Q8WW18 174 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 ZBTB8AQ96BR9 441 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 ZNF471Q9BX82 626 aaPredicted RBP14.74□□□□□ -0.05
VPS54-201ENST00000272322 FAM206AQ9NX38 181 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 CYB5R1Q9UHQ9 305 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 NPTNQ9Y639 398 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 K7ESF4 209 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 SERPINA2P20848 420 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 STARP49675 285 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 ZNF468Q5VIY5 522 aaPredicted RBP14.73□□□□□ -0.05
VPS54-201ENST00000272322 GSG1LQ6UXU4 331 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 C1QL2Q7Z5L3 287 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 YRDCQ86U90 279 aaKnown RBP14.73□□□□□ -0.05
VPS54-201ENST00000272322 GALNT11Q8NCW6 608 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 OR5L2Q8NGL0 311 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 OR5D14Q8NGL3 314 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 DNASE2BQ8WZ79 361 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 ZNF416Q9BWM5 594 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 FAHP16930 419 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 EPHA8P29322 1005 aaPredicted RBP14.73□□□□□ -0.05
VPS54-201ENST00000272322 NKAPLQ5M9Q1 402 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 C9orf135Q5VTT2 229 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 FAM166AQ6J272 317 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 DTX1Q86Y01 620 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 ZNF454Q8N9F8 522 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 OR2AE1Q8NHA4 323 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 C15orf40Q8WUR7 153 aa14.73□□□□□ -0.05
VPS54-201ENST00000272322 OR6C76A6NM76 312 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 OR2AT4A6NND4 320 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 STK17BO94768 372 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 CX3CR1P49238 355 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 ATP1B3P54709 279 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 GMFBP60983 142 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 ZNF813Q6ZN06 617 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 SHDQ96IW2 340 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 WDR13Q9H1Z4 485 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 SDHAF2Q9NX18 166 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 B3GALT5Q9Y2C3 310 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 SNRPGP15A8MWD9 76 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 LUMP51884 338 aaPredicted RBP14.72□□□□□ -0.05
VPS54-201ENST00000272322 TMPPEQ6ZT21 453 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 SPICQ8N5J4 248 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 RBPMSQ93062 196 aaKnown RBP14.72□□□□□ -0.05
VPS54-201ENST00000272322 SPACA9Q96E40 222 aaPredicted RBP14.72□□□□□ -0.05
VPS54-201ENST00000272322 ZNF160Q9HCG1 818 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 ALKBH4Q9NXW9 302 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 MRPS28Q9Y2Q9 187 aaKnown RBP14.72□□□□□ -0.05
VPS54-201ENST00000272322 OR5H14A6NHG9 310 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 TRAPPC6AO75865 159 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 IL5P05113 134 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 CPN1P15169 458 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 IGFBP3P17936 291 aaPredicted RBP14.72□□□□□ -0.05
VPS54-201ENST00000272322 PHYHD1Q5SRE7 291 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 SIGIRRQ6IA17 410 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 PPP1R1CQ8WVI7 109 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 PNPLA2Q96AD5 504 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 PGAM5Q96HS1 289 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 CHRDQ9H2X0 955 aa14.72□□□□□ -0.05
VPS54-201ENST00000272322 SHANK1Q9Y566 2161 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 OTX2P32243 289 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 TUSC1Q2TAM9 212 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 PRSS42Q7Z5A4 293 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 C20orf196Q8IYI0 205 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 STPG2Q8N412 459 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 IFI44Q8TCB0 444 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 FAM221AA4D161 298 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 PMS2P1A4D2B8 440 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 KNG1P01042 644 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 UBCP0CG48 685 aaKnown RBP14.71□□□□□ -0.05
VPS54-201ENST00000272322 PTGDSP41222 190 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
VPS54-201ENST00000272322 CLLU1Q5K131 121 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 ARHGAP5-AS1Q96IT6 56 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 ZNF701Q9NV72 531 aaPredicted RBP14.71□□□□□ -0.05
VPS54-201ENST00000272322 COMMD9Q9P000 198 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 GSKIPQ9P0R6 139 aa14.71□□□□□ -0.05
VPS54-201ENST00000272322 GPN3Q9UHW5 284 aaPredicted RBP14.71□□□□□ -0.05
VPS54-201ENST00000272322 LINC00862A6NCI5 91 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 STMND1H3BQB6 276 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 TRAF3IP2O43734 574 aaPredicted RBP14.71□□□□□ -0.06
VPS54-201ENST00000272322 ANGPTL7O43827 346 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 OR2A4O95047 310 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 LY6G6FQ5SQ64 297 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 TCEAL6Q6IPX3 200 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 FDX2Q6P4F2 183 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 RABEPKQ7Z6M1 372 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 TCEAL3Q969E4 200 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 OR2A7Q96R45 310 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 ACKR4Q9NPB9 350 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 RHBDD3Q9Y3P4 386 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 PRR14LQ5THK1 2151 aa14.71□□□□□ -0.06
VPS54-201ENST00000272322 PTPRZ1P23471 2315 aaPredicted RBP14.7□□□□□ -0.06
VPS54-201ENST00000272322 MEGF11A6BM72 1044 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 TNFSF11O14788 317 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 SRSF10O75494 262 aaKnown RBP14.7□□□□□ -0.06
VPS54-201ENST00000272322 APOC3P02656 99 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms