RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FOXB1Q99853 325 aa14.58□□□□□ -0.07
CCDC40-201ENST00000269318 ATG5Q9H1Y0 275 aa14.58□□□□□ -0.07
CCDC40-201ENST00000269318 NUDT15Q9NV35 164 aa14.58□□□□□ -0.07
CCDC40-201ENST00000269318 ZNF221Q9UK13 617 aa14.58□□□□□ -0.07
CCDC40-201ENST00000269318 PTPRBP23467 1997 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 DMXL1Q9Y485 3027 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 M0R135 149 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 SYNGR3O43761 229 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 DBHP09172 617 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 CAPZA1P52907 286 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 RAB25P57735 213 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF766Q5HY98 468 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 PLXDC2Q6UX71 529 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 PGAP1Q75T13 922 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 FAM109AQ8N4B1 249 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF799Q96GE5 643 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 PAQR5Q9NXK6 330 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-201ENST00000269318 NOSIPQ9Y314 301 aaKnown RBP14.58□□□□□ -0.08
CCDC40-201ENST00000269318 LIPGQ9Y5X9 500 aa14.58□□□□□ -0.08
CCDC40-201ENST00000269318 TRAV18A0A075B6X5 111 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 H7C417 338 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 TM4SF5O14894 197 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 SGCEO43556 437 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 GMDSO60547 372 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 APOC1P02654 83 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 ERCC1P07992 297 aaPredicted RBP14.57□□□□□ -0.08
CCDC40-201ENST00000269318 GSTT2BP0CG30 244 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 SLC6A9P48067 706 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 QRFPP83859 136 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 KRTAP27-1Q3LI81 207 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 OLFML2AQ68BL7 652 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 SPTSSAQ969W0 71 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 MTFP1Q9UDX5 166 aa14.57□□□□□ -0.08
CCDC40-201ENST00000269318 TRAV6A0A075B6T7 132 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 NAP1L6A6NFF2 107 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 A8MV72 311 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-201ENST00000269318 SYNGR4O95473 234 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 ACTL6AO96019 429 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 RAB6AP20340 208 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 TNFSF10P50591 281 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 SCRN3Q0VDG4 424 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 SLC10A1Q14973 349 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 GFOD2Q3B7J2 385 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 RNFT1Q5M7Z0 435 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 TSPO2Q5TGU0 170 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 OR10K2Q6IF99 312 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 TMPRSS7Q7RTY8 843 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 FNDC9Q8TBE3 224 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 PHF21AQ96BD5 680 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 PRRX2Q99811 253 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 LINC00470Q9BZP3 86 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 SLCO5A1Q9H2Y9 848 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 BCO1Q9HAY6 547 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 MCTS1Q9ULC4 181 aaKnown RBP14.56□□□□□ -0.08
CCDC40-201ENST00000269318 V9GYS6 101 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF292O60281 2723 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 CELSR3Q9NYQ7 3312 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 A0A0A6YYH2 397 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 C7orf66A4D0T2 115 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 OR6C6A6NF89 314 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 A6NJ64 397 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 MRPL33O75394 65 aaKnown RBP14.56□□□□□ -0.08
CCDC40-201ENST00000269318 CEACAM1P13688 526 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF32P17041 273 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 ECH1Q13011 328 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 NRN1LQ496H8 165 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF774Q6NX45 483 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 BTN2A1Q7KYR7 527 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 RNF144BQ7Z419 303 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 TUSC5Q8IXB3 177 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 CDH26Q8IXH8 852 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 PAQR4Q8N4S7 273 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-201ENST00000269318 OR1F12Q8NHA8 337 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 SSC4DQ8WTU2 575 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 RNF122Q9H9V4 155 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 EMC3Q9P0I2 261 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 MYEF2Q9P2K5 600 aaKnown RBP14.56□□□□□ -0.08
CCDC40-201ENST00000269318 CSAG2Q9Y5P2 127 aa14.56□□□□□ -0.08
CCDC40-201ENST00000269318 DHRS3O75911 302 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 BPNT1O95861 308 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 ALDOBP05062 364 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 PATE4P0C8F1 98 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF93P35789 620 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-201ENST00000269318 RAG2P55895 527 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 GUCA2AQ02747 115 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 UNC119Q13432 240 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 DRAM2Q6UX65 266 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 TMEM178AQ8NBL3 297 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 FDCSPQ8NFU4 85 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 FGFBP3Q8TAT2 258 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 ZDHHC11Q9H8X9 412 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 FBLN5Q9UBX5 448 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 RAB22AQ9UL26 194 aa14.55□□□□□ -0.08
CCDC40-201ENST00000269318 A0A0A6YYJ9 748 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 IGKV1-9A0A0C4DH69 117 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF724A8MTY0 619 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 RBBP9O75884 186 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 DHFRP00374 187 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 PRSS3P35030 304 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 RRAS2P62070 204 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms