RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 SLC34A2O95436 690 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 MT-ND4LP03901 98 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ARL4DP49703 201 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SKP1P63208 163 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CCL7P80098 99 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SLC35D3Q5M8T2 416 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CBLN3Q6UW01 205 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ARRDC1Q8N5I2 433 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF615Q8N8J6 731 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF383Q8NA42 475 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF417Q8TAU3 575 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 NMNAT2Q9BZQ4 307 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SEC61A2Q9H9S3 476 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 POLE3Q9NRF9 147 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 RALGAPA1Q6GYQ0 2036 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SERINC4A6NH21 518 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 AP4M1O00189 453 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CD74P04233 296 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CD2P06729 351 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CDKN2AP42771 156 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CD226Q15762 336 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 MST1LQ2TV78 715 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 FAM69BQ5VUD6 431 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OR10K2Q6IF99 312 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ADAM5Q6NVV9 412 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ULK3Q6PHR2 472 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 BPIFB2Q8N4F0 458 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OR13C8Q8NGS7 320 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SLAMF9Q96A28 289 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 MARS2Q96GW9 593 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 UCK1Q9HA47 277 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TRBV5-7A0A0A0MS05 114 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TLCD2A6NGC4 264 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TVP23AA6NH52 213 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 LILRA5A6NI73 299 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 NPIPB9F8W1W9 429 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 AGPAT2O15120 278 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF208O43345 1280 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CDC40O60508 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF735P0CB33 412 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 PAX6P26367 422 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SCAND1P57086 179 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 IGLV3-21P80748 117 aaPredicted RBP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 FUT7Q11130 342 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 AIMP2Q13155 320 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF141Q15928 474 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CD163Q86VB7 1156 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TMEM229BQ8NBD8 167 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 PTPMT1Q8WUK0 201 aaPredicted RBP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF524Q96C55 264 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 GAL3ST4Q96RP7 486 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SLC6A7Q99884 636 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 VSIG4Q9Y279 399 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 DBX1A6NMT0 343 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OR4C45A6NMZ5 311 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 C9JQL5 133 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TERTO14746 1132 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CLPSP04118 112 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TPT1P13693 172 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ACKR3P25106 362 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 PPP1R1AQ13522 171 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TEX30Q5JUR7 227 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 DPY19L2P2Q6ZN68 376 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 KCTD9Q7L273 389 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 BAP18Q8IXM2 172 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OR4S1Q8NGB4 309 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OR2G2Q8NGZ5 317 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 AKR7LQ8NHP1 331 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CASTOR1Q8WTX7 329 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 G6PC3Q9BUM1 346 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CUTCQ9NTM9 273 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 FER1L5A0AVI2 2057 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 CNTRLQ7Z7A1 2325 aa14.25□□□□□ -0.13
MAP1LC3B-201ENST00000268607 RNASEK-C17orf49H0YIS7 233 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ABHD16AO95870 558 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 FAM157CP0CG43 387 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 HPGDP15428 266 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 RBM34P42696 430 aaKnown RBP14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 EFNA3P52797 238 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 HSD17B7P56937 341 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 RAB11BQ15907 218 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF550Q7Z398 422 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 PLPP7Q8NBV4 271 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OR1L3Q8NH93 324 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 GPR148Q8TDV2 347 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SRA1Q9HD15 236 aaKnown RBP14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 LOC100289279A0A1B0GTE1 492 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 A0A1W2PPH5 198 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ELOA3DA6NLF2 546 aaPredicted RBP14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF736B4DX44 427 aaPredicted RBP14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SLC31A2O15432 143 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 DUX1O43812 170 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 YIF1AO95070 293 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 DAOP14920 347 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ELOA3BQ3SY89 546 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 POMZP3Q6PJE2 187 aa14.24□□□□□ -0.13
MAP1LC3B-201ENST00000268607 SLC16A9Q7RTY1 509 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms