RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TMEM176BQ3YBM2 270 aaPredicted RBP9.83□□□□□ -0.84
MSH3-201ENST00000265081 NAXDQ8IW45 347 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 OR9K2Q8NGE7 335 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 OR10R2Q8NGX6 335 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 OR51E1Q8TCB6 317 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 FAM46BQ96A09 425 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 SLC6A7Q99884 636 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 CHST6Q9GZX3 395 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 BEX1Q9HBH7 125 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 PCDHGA1Q9Y5H4 931 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 DCDC2BA2VCK2 349 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 SULT2B1O00204 365 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CBR3O75828 277 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 IFNA7P01567 189 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CHRM2P08172 466 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 UBBP0CG47 229 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 ZBTB25P24278 435 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CX3CR1P49238 355 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 P2RX3P56373 397 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 TMEM65Q6PI78 240 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 C1orf210Q8IVY1 113 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 OCSTAMPQ9BR26 566 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 TM2D1Q9BX74 207 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 TINAGL1Q9GZM7 467 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 FN3KRPQ9HA64 309 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 GHRLQ9UBU3 117 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 KCNK7Q9Y2U2 307 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 TRAV14DV4A0A0A6YYC5 116 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 RAB3DO95716 219 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CFDP00746 253 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 KLK3P07288 261 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 GSTP1P09211 210 aaKnown RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 MSR1P21757 451 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 AP2S1P53680 142 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 PNLIPRP3Q17RR3 467 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 FJX1Q86VR8 437 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 DTX1Q86Y01 620 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 MEIOBQ8N635 442 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 OR2AJ1Q8NGZ0 328 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 ZNF416Q9BWM5 594 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 PTRH2Q9Y3E5 179 aaKnown RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 METTL21EPA6NDL7 271 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 PATE3B3GLJ2 98 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 HPP00738 406 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 NFYAP23511 347 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 SRD5A2P31213 254 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 THBS4P35443 961 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 SEC61A1P61619 476 aaKnown RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 GRK1Q15835 563 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 VAX1Q5SQQ9 334 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 RNF144BQ7Z419 303 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 FTMTQ8N4E7 242 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CCDC107Q8WV48 283 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 KCNE4Q8WWG9 221 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 SGCZQ96LD1 299 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 NKX3-1Q99801 234 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 PRDM6Q9NQX0 595 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 ASH2LQ9UBL3 628 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 VSIG4Q9Y279 399 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 TMEM82A0PJX8 343 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 LRRC3CA6NJW4 275 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 MFNGO00587 321 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 RER1O15258 196 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CDC14BO60729 498 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 SLC25A4P12235 298 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 CSNK2A1P68400 391 aaPredicted RBP9.82□□□□□ -0.84
MSH3-201ENST00000265081 SIGLEC14Q08ET2 396 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 STK11Q15831 433 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 DCAF12L2Q5VW00 463 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 OR8H1Q8NGG4 311 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 PRRT1Q99946 306 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 ZPBPQ9BS86 351 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 UBQLN2Q9UHD9 624 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 GTF2A1LQ9UNN4 478 aa9.82□□□□□ -0.84
MSH3-201ENST00000265081 ZNF716A6NP11 495 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF736B4DX44 427 aaPredicted RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 C9J4A7 227 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 MRPS34P82930 218 aaKnown RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 OPCMLQ14982 345 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 FAM27BQ5VT28 67 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 IDO2Q6ZQW0 420 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 JAGN1Q8N5M9 183 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 OR5M8Q8NGP6 311 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 OR2I1PQ8NGU4 316 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 DVL3Q92997 716 aaPredicted RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 SFXN2Q96NB2 322 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 SOX7Q9BT81 388 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 DDA1Q9BW61 102 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 SRXN1Q9BYN0 137 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 CENPMQ9NSP4 180 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 F5H5P2 479 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 SMAD9O15198 467 aaKnown RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF93P35789 620 aaPredicted RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 ZNF81P51508 661 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 PLAC9Q5JTB6 97 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 CLVS2Q5SYC1 327 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 PEG10Q86TG7 708 aaKnown RBP9.81□□□□□ -0.84
MSH3-201ENST00000265081 NAA40Q86UY6 237 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 PIGQQ9BRB3 760 aa9.81□□□□□ -0.84
MSH3-201ENST00000265081 NAA11Q9BSU3 229 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms