RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CDCP1Q9H5V8 836 aa15.91■□□□□ 0.14
NOTCH3-201ENST00000263388 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
NOTCH3-201ENST00000263388 OR2M5A3KFT3 312 aa15.91■□□□□ 0.14
NOTCH3-201ENST00000263388 DSCR3O14972 297 aa15.91■□□□□ 0.14
NOTCH3-201ENST00000263388 UBE2IP63279 158 aaKnown RBP15.91■□□□□ 0.14
NOTCH3-201ENST00000263388 C2CD4CQ8TF44 421 aa15.91■□□□□ 0.14
NOTCH3-201ENST00000263388 GABRB1P18505 474 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 CTU2Q2VPK5 515 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 DND1Q8IYX4 353 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 GPX8Q8TED1 209 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 ZDHHC11Q9H8X9 412 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 PHF3Q92576 2039 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 MARF1Q9Y4F3 1742 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 FCGR2CP31995 323 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 SLC38A6Q8IZM9 456 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 BOLA1Q9Y3E2 137 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 TIMM10BQ9Y5J6 103 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 CLEC2LP0C7M8 214 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 GP2P55259 537 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 SHHQ15465 462 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 MLF2Q15773 248 aaPredicted RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF750Q32MQ0 723 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 LRRTM1Q86UE6 522 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 STAG3L2P0CL84 134 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 PRR14Q9BWN1 585 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 NLRC3Q7RTR2 1065 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 SLC5A6Q9Y289 635 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 M0R135 149 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 OR5I1Q13606 314 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF799Q96GE5 643 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 NOL4LQ96MY1 436 aaPredicted RBP15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 ASH2LQ9UBL3 628 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 QDPRP09417 244 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 KCNE4Q8WWG9 221 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 LAT2Q9GZY6 243 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 ZBP1Q9H171 429 aa15.9■□□□□ 0.14
NOTCH3-201ENST00000263388 K7ESM1 405 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 RAB27BO00194 218 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 HOXC11O43248 304 aaPredicted RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 CLN3Q13286 438 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 TMEM81Q6P7N7 255 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 DUS3LQ96G46 650 aaKnown RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 AKR1E2Q96JD6 320 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 SDK2Q58EX2 2172 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 OR10A3P58181 314 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 SPANXN5Q5MJ07 72 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 LAIR1Q6GTX8 287 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 DGAT2L6Q6ZPD8 337 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ARHGDIGQ99819 225 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 NACAE9PAV3 2078 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 TMEM202A6NGA9 273 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ZNF727A8MUV8 499 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 PCSK6P29122 969 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 GNB1P62873 340 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 NKAIN4Q8IVV8 208 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 THAP10Q9P2Z0 257 aaPredicted RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 SLCO1B1Q9Y6L6 691 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 R4GMQ9 66 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 QSER1Q2KHR3 1735 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 MMP15P51511 669 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 SELENBP1Q13228 472 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ZFP62Q8NB50 900 aaPredicted RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 OR2AK2Q8NG84 335 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 CRLF2Q9HC73 371 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 MED12Q93074 2177 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 A0A1W2PR48 441 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 G3V3Y1 287 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ZNF629Q9UEG4 869 aaPredicted RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 TRAV1-2A0A0B4J238 106 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ZNF561Q8N587 486 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 CCDC74AQ96AQ1 378 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 GPR84Q9NQS5 396 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ACSM4P0C7M7 580 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 RPL12P30050 165 aaKnown RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ZNF154Q13106 437 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 CPEB2Q7Z5Q1 589 aaKnown RBP15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 SYS1Q8N2H4 156 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 S1PR3Q99500 378 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 C19orf43Q9BQ61 176 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 SLC25A19Q9HC21 320 aa15.89■□□□□ 0.13
NOTCH3-201ENST00000263388 ZNF816-ZNF321PA0A0X1KG74 233 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 FITM1A5D6W6 292 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 ANKRD61A6NGH8 418 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 CD27P26842 260 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 OR10P1Q8NGE3 313 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 MED18Q9BUE0 208 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 PARP12Q9H0J9 701 aaKnown RBP15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 PIGPP57054 158 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 TCRBV5S1A1TA0A578 114 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 PRSS37A4D1T9 235 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 CCSO14618 274 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 BMI1P35226 326 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 ELSPBP1Q96BH3 223 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 VEGFBP49765 207 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 GABRG1Q8N1C3 465 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 ZNF354AO60765 605 aaPredicted RBP15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 CD1CP29017 333 aa15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 RBM45Q8IUH3 476 aaKnown RBP15.88■□□□□ 0.13
NOTCH3-201ENST00000263388 MFSD4AQ8N468 514 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms