RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 TVP23CQ96ET8 276 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 CXorf36Q9H7Y0 433 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 EP400Q96L91 3159 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 NPIPA2E9PIF3 369 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 KLK2P20151 261 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 TBPP20226 339 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 RIPPLY3P57055 190 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 MRPS21P82921 87 aaKnown RBP11.75□□□□□ -0.53
TMEM260-201ENST00000261556 CDKN3Q16667 212 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-201ENST00000261556 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 VRK2Q86Y07 508 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 BAGE3Q86Y29 109 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 BAGE2Q86Y30 109 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 TOMM40LQ969M1 308 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 MCHR2Q969V1 340 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 TEAD3Q99594 435 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 FKRPQ9H9S5 495 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 PRSS16Q9NQE7 514 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 KIR2DS5A0A0G2JLQ3 304 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 A0A0G2JNG1 304 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 KDM4EB2RXH2 506 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-201ENST00000261556 H3BQ15 152 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 KIR2DS3K7RE56 304 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 MMP9P14780 707 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 KIR2DS5Q14953 304 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 RAET1LQ5VY80 246 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 LSRQ86X29 649 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-201ENST00000261556 PLPP7Q8NBV4 271 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 GPBAR1Q8TDU6 330 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 R3HDM4Q96D70 268 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 C1QTNF3Q9BXJ4 246 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF281Q9Y2X9 895 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 SMCHD1A6NHR9 2005 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 PRSS38A1L453 326 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 PGFP49763 221 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 CDK5Q00535 292 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 DPPA3Q6W0C5 159 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 SLC35D2Q76EJ3 337 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 LYG2Q86SG7 212 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 KCNK15Q9H427 330 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 IL19Q9UHD0 177 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 B3GALT1Q9Y5Z6 326 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 A8MWP6 167 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 JTBO76095 146 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 CSTBP04080 98 aaKnown RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 ERVS71-1P61550 626 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 KIR2DS3Q14952 304 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 ARRDC3Q96B67 414 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 AMY2BP19961 511 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 TEAD1P28347 426 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 GNMTQ14749 295 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 TMEM255BQ8WV15 326 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 WBP1Q96G27 269 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF638Q14966 1978 aaKnown RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 K7ERU9 68 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 RAB27BO00194 218 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 HMGN2P05204 90 aaKnown RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 PRLHRP49683 370 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 TLE3Q04726 772 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 PRDX1Q06830 199 aaKnown RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 RAB32Q13637 225 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 TRIM61Q5EBN2 209 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 ALG10BQ5I7T1 473 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 SLC35D3Q5M8T2 416 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 RPL22L1Q6P5R6 122 aaKnown RBP11.74□□□□□ -0.53
TMEM260-201ENST00000261556 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 MARCH1Q8TCQ1 289 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 SCGB3A2Q96PL1 93 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 DMRT3Q9NQL9 472 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 LRIT1Q9P2V4 623 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 GNG13Q9P2W3 67 aa11.74□□□□□ -0.53
TMEM260-201ENST00000261556 FER1L6Q2WGJ9 1857 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 H7BYZ3 331 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 GSTZ1O43708 216 aaPredicted RBP11.73□□□□□ -0.53
TMEM260-201ENST00000261556 LDB3O75112 727 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms