RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SNRPBP14678 240 aaKnown RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 DEFB109BQ30KR1 87 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 ELOA3BQ3SY89 546 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 FADS6Q8N9I5 356 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 ELOA3Q8NG57 546 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 OR2M3Q8NG83 312 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 C14orf79Q96F83 325 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 VRK1Q99986 396 aaPredicted RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 SPOCK3Q9BQ16 436 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 ZNF471Q9BX82 626 aaPredicted RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 KRCC1Q9NPI7 259 aaPredicted RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 MEPEQ9NQ76 525 aaPredicted RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 C20orf141Q9NUB4 165 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 BLOC1S5-TXNDC5H3BN57 136 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 PPIHO43447 177 aaKnown RBP16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 NEURL1O76050 574 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 CD2P06729 351 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 EPXP11678 715 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 HTR1FP30939 366 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 GPR4P46093 362 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 AADACL4Q5VUY2 407 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 IL34Q6ZMJ4 242 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR52B4Q8NGK2 314 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR52I2Q8NH67 350 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 ABHD4Q8TB40 342 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 TNFAIP8L1Q8WVP5 186 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 SIGLEC12Q96PQ1 595 aa16.83■□□□□ 0.28
COL4A3BP-201ENST00000261415 PLPP2O43688 288 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 WISP1O95388 367 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 ACTL6AO96019 429 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 F12P00748 615 aaPredicted RBP16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 NQO2P16083 231 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 PLA2G5P39877 138 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 SPINK14Q6IE38 97 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 GRINAQ7Z429 371 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMEM234Q8WY98 164 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 ST8SIA1Q92185 356 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 SLAMF9Q96A28 289 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 MEGF10Q96KG7 1140 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF552Q9H707 407 aaPredicted RBP16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 PLA2G3Q9NZ20 509 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 VDAC3Q9Y277 283 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 URB1O60287 2271 aaKnown RBP16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 A0A1W2PPE3 182 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 TCAPO15273 167 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 SDHAP31040 664 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 CCL11P51671 97 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 TSPAN31Q12999 210 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 C2orf68Q2NKX9 166 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 DNLZQ5SXM8 178 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR4K17Q8NGC6 315 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 STOML3Q8TAV4 291 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 MFRPQ9BY79 579 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 TSPAN10Q9H1Z9 355 aaPredicted RBP16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 MMP26Q9NRE1 261 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 MED17Q9NVC6 651 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 H2AFY2Q9P0M6 372 aaPredicted RBP16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 DKK4Q9UBT3 224 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 SSUH2Q9Y2M2 353 aa16.82■□□□□ 0.28
COL4A3BP-201ENST00000261415 MED12Q93074 2177 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 A0A0G2JMM0 328 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 A0A1W2PPB8 328 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 A0A1W2PRS3 328 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 KIR3DP1A8MWS1 328 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 KLF4O43474 513 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR2T1O43869 369 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ATF1P18846 271 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 RAB4AP20338 218 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 FAUP35544 74 aaKnown RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 DNASE1L1P49184 302 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF41P51814 821 aaPredicted RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 TAS2R43P59537 309 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 MFAP5Q13361 173 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR1C1Q15619 314 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF239Q16600 458 aaKnown RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 FAM27D1Q5T7N8 215 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 DCAF12L2Q5VW00 463 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 POMZP3Q6PJE2 187 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ESPNLQ6ZVH7 1005 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 GTPBP8Q8N3Z3 284 aaPredicted RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 FDCSPQ8NFU4 85 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 C15orf40Q8WUR7 153 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 BPIFA2Q96DR5 249 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 PTGES2Q9H7Z7 377 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 IGKV1D-42A0A075B6H8 117 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 VSIG10L2P0DP72 767 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 COX5BP10606 129 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 SLC2A1P11166 492 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 POLR2HP52434 150 aaKnown RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 CD81P60033 236 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 PLPPR5Q32ZL2 321 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 MAMDC2Q7Z304 686 aaPredicted RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ACBD7Q8N6N7 88 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF383Q8NA42 475 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF671Q8TAW3 534 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 FBXO17Q96EF6 278 aa16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 JSRP1Q96MG2 331 aaPredicted RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 CCDC86Q9H6F5 360 aaKnown RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 ISG20L2Q9H9L3 353 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms