RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CCR9P51686 369 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 NR1H2P55055 460 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 TAS2R43P59537 309 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 NKX6-1P78426 367 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 MLLT11Q13015 90 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 SNTB2Q13425 540 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 ODF4Q2M2E3 257 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 SP5Q6BEB4 398 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 DMKNQ6E0U4 476 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 ELMOD2Q8IZ81 293 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 KBTBD8Q8NFY9 601 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 OR52H1Q8NGJ2 320 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 OR2AE1Q8NHA4 323 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 MUL1Q969V5 352 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 PDCD1LG2Q9BQ51 273 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 ISYNA1Q9NPH2 558 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 PKDREJQ9NTG1 2253 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 DOPEY2Q9Y3R5 2298 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 TRBV2A0A0J9YWF9 115 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 SMIM31A0A1B0GVY4 71 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 J3QW42 95 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 GPRIN2O60269 458 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 ZFPL1O95159 310 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 PLAUP00749 431 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 CELP19835 753 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 PSMB9P28065 219 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 RAD52P43351 418 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 GP2P55259 537 aaKnown RBP13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 PPP1CBP62140 327 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 TIGD6Q17RP2 521 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 GFOD2Q3B7J2 385 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 SPATA46Q5T0L3 261 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 RDH10Q8IZV5 341 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 OR1J1Q8NGS3 322 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 SGK3Q96BR1 496 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 SMIM19Q96E16 107 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 PSMG3-AS1Q96PY0 264 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 TMEM204Q9BSN7 226 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 OR10A2Q9H208 303 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 SP140LQ9H930 580 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 KCNN3Q9UGI6 736 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 RNF115Q9Y4L5 304 aa13.61□□□□□ -0.23
CCDC90B-201ENST00000260054 ABCA4P78363 2273 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 PLPP2O43688 288 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 CLPTM1O96005 669 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 SLC3A1Q07837 685 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 SYT6Q5T7P8 510 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 NUP37Q8NFH4 326 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 OR51E1Q8TCB6 317 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 NEUROG1Q92886 237 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 LYZL4Q96KX0 146 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 PGLYRP3Q96LB9 341 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 SOX7Q9BT81 388 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 OR2J1Q9GZK6 312 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 PTTG3PQ9NZH4 202 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 SPEF1Q9Y4P9 236 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 ROS1P08922 2347 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 PLCE1Q9P212 2302 aa13.6□□□□□ -0.23
CCDC90B-201ENST00000260054 A0A0U1RQV5 110 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 A6NNC1 897 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 P2RY10O00398 339 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 IGLV3-1P01715 115 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 TFAP2AP05549 437 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 CPEP16870 476 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 JUNBP17275 347 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 COL8A1P27658 744 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 PRSS12P56730 875 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 ZNF92Q03936 586 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 TPBGQ13641 420 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 GK2Q14410 553 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 HLXQ14774 488 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 SSX1Q16384 188 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 MSMPQ1L6U9 139 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 LIPKQ5VXJ0 399 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 UNQ6126/PRO20091Q6UXV3 157 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 OR5AK2Q8NH90 309 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 SLC25A40Q8TBP6 338 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 GHSRQ92847 366 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 UFD1Q92890 307 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 SPSB4Q96A44 273 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 MARS2Q96GW9 593 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 REEP6Q96HR9 211 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 POU2F3Q9UKI9 436 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 ATP23Q9Y6H3 246 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 A0A1B0GTI1 187 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 TMEM212A6NML5 194 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 H3BSH0 61 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 XRCC2O43543 280 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 ATE1O95260 518 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 GLRXP35754 106 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 LIPAP38571 399 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 LSAMPQ13449 338 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms