RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 PTP4A3O75365 173 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
KCTD3-201ENST00000259154 HSD11B2P80365 405 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 RAB30Q15771 203 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 ADIRFQ15847 76 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
KCTD3-201ENST00000259154 AWAT1Q58HT5 328 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 OR2T2Q6IF00 324 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 CD300LDQ6UXZ3 194 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 MCATQ8IVS2 390 aaKnown RBP13.39□□□□□ -0.27
KCTD3-201ENST00000259154 ADAD2Q8NCV1 583 aaKnown RBP13.39□□□□□ -0.27
KCTD3-201ENST00000259154 OR6K3Q8NGY3 331 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 OR2G3Q8NGZ4 309 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 OR6S1Q8NH40 331 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 NICN1Q9BSH3 213 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
KCTD3-201ENST00000259154 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
KCTD3-201ENST00000259154 CPED1A4D0V7 1026 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 LILRB3O75022 631 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 LILRB5O75023 590 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 CST7O76096 145 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 WNT11O96014 354 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 C9orf135Q5VTT2 229 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 OR51F2Q8NH61 342 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 SHARPINQ9H0F6 387 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF160Q9HCG1 818 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 SERGEFQ9UGK8 458 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 DENND4CQ5VZ89 1909 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 HMSDA8MTL9 139 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 HRKO00198 91 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 HMGB3O15347 200 aaKnown RBP13.38□□□□□ -0.27
KCTD3-201ENST00000259154 RPL23AP62750 156 aaKnown RBP13.38□□□□□ -0.27
KCTD3-201ENST00000259154 INPP5JQ15735 1006 aaPredicted RBP13.38□□□□□ -0.27
KCTD3-201ENST00000259154 RNF212Q495C1 297 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 STT3BQ8TCJ2 826 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 NIPSNAP3BQ9BS92 247 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 FLRT3Q9NZU0 649 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 PIN1P1O15428 100 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 LCATP04180 440 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 SHHQ15465 462 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 SLC22A25Q6T423 547 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 Q6ZSR6 202 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 PHOSPHO2Q8TCD6 241 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 OR1E3Q8WZA6 343 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
KCTD3-201ENST00000259154 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
KCTD3-201ENST00000259154 DIDO1Q9BTC0 2240 aaKnown RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 SPINT1O43278 529 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 CX3CR1P49238 355 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 BIDP55957 195 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 PRTGQ2VWP7 1150 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 AGBL4Q5VU57 503 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 RPUSD3Q6P087 351 aaKnown RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 C20orf196Q8IYI0 205 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 LILRB2Q8N423 598 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 LPAR4Q99677 370 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 KPTNQ9Y664 436 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 SHISA8B8ZZ34 492 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 HLA-HP01893 362 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 PLPP5Q8NEB5 264 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 RSPRY1Q96DX4 576 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 SERINC1Q9NRX5 453 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 RASL12Q9NYN1 266 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 PHYHO14832 338 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 CTSVO60911 334 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 SEMA4FO95754 770 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 CRABP1P29762 137 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF41P51814 821 aaPredicted RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 TSPO2Q5TGU0 170 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 OVCH2Q7RTZ1 564 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 C16orf52Q8NHV5 167 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 ABHD6Q9BV23 337 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 PATZ1Q9HBE1 687 aaKnown RBP13.37□□□□□ -0.27
KCTD3-201ENST00000259154 KLHDC2Q9Y2U9 406 aa13.37□□□□□ -0.27
KCTD3-201ENST00000259154 SLC17A2O00624 439 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 TBX6O95947 436 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 MUC1P15941 1255 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF43P17038 809 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 TAF9Q16594 264 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 GUK1Q16774 197 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 FAM199XQ6PEV8 388 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 GPR137CQ8N3F9 429 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 PGLYRP3Q96LB9 341 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF2Q9BSG1 426 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 PRRG4Q9BZD6 226 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 C7orf77A4D0Y5 90 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 UTS2O95399 124 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 EDN3P14138 238 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 HNRNPA2B1P22626 353 aaKnown RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 FCRL6Q6DN72 434 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms