RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 B3GALT1Q9Y5Z6 326 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 CCDC88CQ9P219 2028 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SERINC4A6NH21 518 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 FAM227AF5H4B4 570 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 RAB29O14966 203 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SPRY1O43609 319 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TPST2O60704 377 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ALOX12BO75342 701 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SYNGR4O95473 234 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 CD74P04233 296 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 CFHR2P36980 270 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 FRKP42685 505 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TAS2R30P59541 319 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 CRADDP78560 199 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 GAGE5Q13069 117 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 GAGE6Q13070 117 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ELOBQ15370 118 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TNXAQ16473 311 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TTLL9Q3SXZ7 439 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SEZ6Q53EL9 994 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TOMM20LQ6UXN7 152 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OLIG3Q7RTU3 272 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 GPSM1Q86YR5 675 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 IZUMO1Q8IYV9 350 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 DTWD1Q8N5C7 304 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OR2T12Q8NG77 320 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OR11G2Q8NGC1 345 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OR2Y1Q8NGV0 311 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 STYXQ8WUJ0 223 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 P2RX4Q99571 388 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 GPA33Q99795 319 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 PLAC1Q9HBJ0 212 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SLC7A10Q9NS82 523 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF586Q9NXT0 402 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 BET1LQ9NYM9 111 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 PTRH2Q9Y3E5 179 aaKnown RBP6.93□□□□□ -1.3
GPNMB-201ENST00000258733 A0A1B0GUS0 222 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 OR6C6A6NF89 314 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 C3orf70A6NLC5 250 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 SNRPGP15A8MWD9 76 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 F5H5T6 163 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 GABRPO00591 440 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 HCRTR1O43613 425 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 CSO75390 466 aaKnown RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 MT-ND4P03905 459 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 RAB40ALP0C0E4 278 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ELK1P19419 428 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 AK4P27144 223 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 GNG3P63215 75 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 NKG7Q16617 165 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF766Q5HY98 468 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 UEVLDQ8IX04 471 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF440Q8IYI8 595 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 BEST3Q8N1M1 668 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ARIH2OSQ8N7S6 290 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 OR2T27Q8NH04 317 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 SLC35B2Q8TB61 432 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 GALMQ96C23 342 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 KCTD12Q96CX2 325 aaKnown RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 LINC00470Q9BZP3 86 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM39BQ9GZU3 492 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ATG5Q9H1Y0 275 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 SLC7A7Q9UM01 511 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 NME7Q9Y5B8 376 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 LEFTY2O00292 366 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 GRAP2O75791 330 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 HAND1O96004 215 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 THY1P04216 161 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 SERPIND1P05546 499 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 PGA4P0DJD7 388 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 PGA5P0DJD9 388 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ARSAP15289 507 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 GPX3P22352 226 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 HTR6P50406 440 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 TAS2R43P59537 309 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 TEAD2Q15562 447 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF658BQ4V348 819 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 XKR7Q5GH72 579 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 PRAMEF17Q5VTA0 474 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 AADACL3Q5VUY0 350 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 NPNTQ6UXI9 565 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 FBXO16Q8IX29 292 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 LGI3Q8N145 548 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 LINC00471Q8N535 108 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 EID2Q8N6I1 236 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 NRGNQ92686 78 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 RAB8BQ92930 207 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 TNFRSF13CQ96RJ3 184 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 SLC25A18Q9H1K4 315 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 CRIM1Q9NZV1 1036 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 RBBP6Q7Z6E9 1792 aaKnown RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 COL1A1P02452 1464 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-201ENST00000258733 FOCADQ5VW36 1801 aa6.92□□□□□ -1.3
GPNMB-201ENST00000258733 B4DGG1 531 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 K7EPK0 472 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 DCTN6O00399 190 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 GFRA2O00451 464 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 ST8SIA3O43173 380 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms