RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CA11O75493 328 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 KNG1P01042 644 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR4Q2P0C623 313 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SNRPBP14678 240 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GPR12P47775 334 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SDHAF4Q5VUM1 108 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR4S1Q8NGB4 309 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PPP1R35Q8TAP8 253 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ADAMTS18Q8TE60 1221 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SMIM7Q9BQ49 75 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ELL3Q9HB65 397 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ELOVL5Q9NYP7 299 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 FAM221AA4D161 298 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CEBPZOSA8MTT3 80 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 HAS3O00219 553 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 DVL2O14641 736 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CTXN2P0C2S0 81 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PGA4P0DJD7 388 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PGA5P0DJD9 388 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GPR1P46091 355 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GAGE5Q13069 117 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GAGE6Q13070 117 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF79Q15937 498 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 FIGLAQ6QHK4 219 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM184AQ6ZMB5 413 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ESPNLQ6ZVH7 1005 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 MAVSQ7Z434 540 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 C1QL4Q86Z23 238 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 EDARADDQ8WWZ3 215 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SLAMF6Q96DU3 332 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 FUBP3Q96I24 572 aaKnown RBP eCLIP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM191AQ9H0A3 160 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PLEKHA1Q9HB21 404 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PDLIM7Q9NR12 457 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PARP11Q9NR21 331 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 JKAMPQ9P055 326 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 MSRAQ9UJ68 235 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 BAZ2BQ9UIF8 2168 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 COLCA2A8K830 154 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 G3V2L1 256 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 J3QW42 95 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SEMG1P04279 462 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF865P0CJ78 1059 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 KITLGP21583 273 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PSMB3P49720 205 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CLDN18P56856 261 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 RPS15P62841 145 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SQSTM1Q13501 440 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FAAP20Q6NZ36 180 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SH2D5Q6ZV89 423 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 POC1AQ8NBT0 407 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 RBMXL1Q96E39 390 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PCED1BQ96HM7 432 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 GUCD1Q96NT3 240 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FIZ1Q96SL8 496 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 LAT2Q9GZY6 243 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 C1orf198Q9H425 327 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PLEKHA2Q9HB19 425 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PLEKHJ1Q9NW61 149 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 UFC1Q9Y3C8 167 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CHD4Q14839 1912 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ZFP92A6NM28 416 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 H7BY64 318 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CORTO00230 105 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 VAMP5O95183 116 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CRISP2P16562 243 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 METAP1P53582 386 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 GLYR1Q49A26 553 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM128Q5BJH2 165 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 VWA2Q5GFL6 755 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SPANXN4Q5MJ08 99 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 YOD1Q5VVQ6 348 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ZFAND6Q6FIF0 208 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 MDGA2Q7Z553 956 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 OR1N2Q8NGR9 330 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 NETO1Q8TDF5 533 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SGK2Q9HBY8 427 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 KIAA1551Q9HCM1 1747 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FOXD3Q9UJU5 478 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FUT9Q9Y231 359 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 A0A087WV62 115 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 A4D1N5 150 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 BMPR1BO00238 502 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 EIF4E2O60573 245 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 UMODP07911 640 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 HTR1AP08908 422 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 IQCF3P0C7M6 154 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 LBX1P52954 281 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 THSD4Q6ZMP0 1018 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 OR2T10Q8NGZ9 312 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ARSGQ96EG1 525 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 UBL7Q96S82 380 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 GABARAPL1Q9H0R8 117 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC6A13Q9NSD5 602 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 UBE2J1Q9Y385 318 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 A0A0U1RQF3 1178 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CATP04040 527 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PGA3P0DJD8 388 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms