RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 C2orf76Q3KRA6 126 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 LRRC10Q5BKY1 277 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 STAC2Q6ZMT1 411 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 ADGRG3Q86Y34 549 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 MRGPRX3Q96LB0 322 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 AK3Q9UIJ7 227 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 FLVCR1Q9Y5Y0 555 aa7.87□□□□□ -1.15
PTCD3-201ENST00000254630 SMIM18P0DKX4 95 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 CTRB1P17538 263 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ERHP84090 104 aaKnown RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 DGCR2P98153 550 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 EIF3IQ13347 325 aaKnown RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 AQP6Q13520 282 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 CTRB2Q6GPI1 263 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 KIRREL2Q6UWL6 708 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 PTOV1Q86YD1 416 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 THNSL2Q86YJ6 484 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SYS1Q8N2H4 156 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 MFSD4AQ8N468 514 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 DTWD2Q8NBA8 298 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 OR4D9Q8NGE8 314 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 AKR7LQ8NHP1 331 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SMIM19Q96E16 107 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 TCEAL7Q9BRU2 100 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 CDCA4Q9BXL8 241 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 FOXJ3Q9UPW0 622 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 IAPPP10997 89 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SOX18P35713 384 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 BPIFB3P59826 476 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 CMTM4Q8IZR5 234 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 OR13C8Q8NGS7 320 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 KTI12Q96EK9 354 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 BTF3L4Q96K17 158 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 S1PR3Q99500 378 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 TUBG2Q9NRH3 451 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 R4GN57 208 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 A0A0A6YYJ9 748 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 M0R296 226 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 HNF1AP20823 631 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ISL1P61371 349 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 GSG1Q2KHT4 349 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 WIPI1Q5MNZ9 446 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 OTPQ5XKR4 325 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SLC51BQ86UW2 128 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ST8SIA4Q92187 359 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 RDH5Q92781 318 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 DUS3LQ96G46 650 aaKnown RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ADAM19Q9H013 955 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 FZR1Q9UM11 496 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ADAMTS7Q9UKP4 1686 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 FAM221AA4D161 298 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 MAGEB4O15481 346 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 OR13C7P0DN81 318 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF117Q03924 483 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 HIST2H3AQ71DI3 136 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 OR1F12Q8NHA8 337 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 PINX1Q96BK5 328 aaKnown RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 FYTTD1Q96QD9 318 aaKnown RBP7.86□□□□□ -1.15
PTCD3-201ENST00000254630 CHST6Q9GZX3 395 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SERGEFQ9UGK8 458 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 B9D1Q9UPM9 204 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 A0A087WUJ7 227 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 ARPC3O15145 178 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 PAX6P26367 422 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 OR10R2Q8NGX6 335 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SCARB1Q8WTV0 552 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SPACA5Q96QH8 159 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SIAEQ9HAT2 523 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 A4GNTQ9UNA3 340 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 SLC22A13Q9Y226 551 aa7.86□□□□□ -1.15
PTCD3-201ENST00000254630 FAM90A27PA6NNH2 459 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 GIPP09681 153 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 HRH1P35367 487 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM92Q6UXU6 159 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM179BQ7Z7N9 219 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 OR2Z1Q8NG97 314 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 MTCH2Q9Y6C9 303 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 KCNE3Q9Y6H6 103 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 SERTM2A0A1B0GWG4 89 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 C20orf202A1L168 122 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 OR2W5A6NFC9 320 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 SDCBPO00560 298 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TAAR5O14804 337 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 NDUFB3O43676 98 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 DDOSTP39656 456 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FABP5Q01469 135 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 ACOT6Q3I5F7 207 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 HSD17B11Q8NBQ5 300 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 MITD1Q8WV92 249 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 APOBEC3DQ96AK3 386 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 CNRIP1Q96F85 164 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FOXB1Q99853 325 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 VN1R1Q9GZP7 353 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FSCN3Q9NQT6 498 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 DLL4Q9NR61 685 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms