RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 GTPBP8Q8N3Z3 284 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 PROK2Q9HC23 129 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 MYOZ1Q9NP98 299 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 VSIG4Q9Y279 399 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 E9PLN8 166 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 CX3CR1P49238 355 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 H3F3AP84243 136 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 DHRS2Q13268 280 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 MARVELD3Q96A59 401 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 FAM71F1Q96KD3 344 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 CDX2Q99626 313 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 TMA7Q9Y2S6 64 aaKnown RBP17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 HS3ST3B1Q9Y662 390 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 C5orf63A6NC05 138 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 G3V3Y1 287 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 MASP2O00187 686 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 PDGFAP04085 211 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 KLK3P07288 261 aaPredicted RBP17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 RRASP10301 218 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 LIPCP11150 499 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 AP2S1P53680 142 aaPredicted RBP17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 SORDQ00796 357 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 RNASE10Q5GAN6 216 aaKnown RBP17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 PHYHD1Q5SRE7 291 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 FAM57BQ71RH2 274 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 TMEM104Q8NE00 496 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF416Q9BWM5 594 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 SELENOIQ9C0D9 397 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF700Q9H0M5 742 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 SLC2A8Q9NY64 477 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF230Q9UIE0 474 aaPredicted RBP17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 LOC100509620A0A075B734 347 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 DISC1C4P0D8 188 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 I3L521 148 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 SNAPC5O75971 98 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 TDGF1P13385 188 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 FKBP2P26885 142 aaKnown RBP17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 CXADRP78310 365 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 MEF2DQ14814 521 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 GFOD2Q3B7J2 385 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 OPN5Q6U736 354 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 UBALD2Q8IYN6 164 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF101Q8IZC7 436 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 OR10R2Q8NGX6 335 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 C1orf147Q96MC9 270 aaPredicted RBP17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 ARL6Q9H0F7 186 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 PRDM6Q9NQX0 595 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 FBLN5Q9UBX5 448 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 KCNN3Q9UGI6 736 aa17.25■□□□□ 0.35
CDC42EP1-201ENST00000249014 SDK2Q58EX2 2172 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 A0A0A6YYD4 124 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 IGHV3-15A0A0B4J1V0 119 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 NTN3O00634 580 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 SMAD9O15198 467 aaKnown RBP17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 SSX5O60225 188 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 CRYZL1O95825 349 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 ERCC1P07992 297 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF250P15622 560 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 PPP3CBP16298 524 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 OR3A4PP47883 348 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 GLIPR1L1Q6UWM5 242 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 Q7L0L9 218 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 WDR5BQ86VZ2 330 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF283Q8N7M2 679 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 STEAP2Q8NFT2 490 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 CYYR1Q96J86 154 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 ANGPTL4Q9BY76 406 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 LPAR5Q9H1C0 372 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 KCNK7Q9Y2U2 307 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 MUC3AQ02505 3323 aa17.24■□□□□ 0.35
CDC42EP1-201ENST00000249014 TRAV14DV4A0A0A6YYC5 116 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 SHOXO15266 292 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 CCL1P22362 96 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 SGCAQ16586 387 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 AANATQ16613 207 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 DMRTC1Q5HYR2 192 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 NAA40Q86UY6 237 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 AGBL5Q8NDL9 886 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 PRRT1Q99946 306 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 MRPS28Q9Y2Q9 187 aaKnown RBP17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 A0A087WZY1 265 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZIC3O60481 467 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 RP2O75695 350 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 LIFP15018 202 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 HRH1P35367 487 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 EXT1Q16394 746 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 WBP1Q96G27 269 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZNF385AQ96PM9 386 aaKnown RBP17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 UCN2Q96RP3 112 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 KIAA1549Q9HCM3 1950 aa17.23■□□□□ 0.35
CDC42EP1-201ENST00000249014 A0A1W2PP11 408 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 HLA-AP01891 365 aaKnown RBP17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 MPZP25189 248 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 CD96P40200 585 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 ZFP36L1Q07352 338 aaKnown RBP17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 FAM209AQ5JX71 171 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 RAET1LQ5VY80 246 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 ALKAL2Q6UX46 152 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 PGAP1Q75T13 922 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms