RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ALKBH3Q96Q83 286 aaPredicted RBP16.23■□□□□ 0.19
HOXC11-201ENST00000243082 GAL3ST1Q99999 423 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 ACTR6Q9GZN1 396 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 C20orf85Q9H1P6 137 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 SLC6A15Q9H2J7 730 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 TP63Q9H3D4 680 aaPredicted RBP16.23■□□□□ 0.19
HOXC11-201ENST00000243082 PLEK2Q9NYT0 353 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 EP300Q09472 2414 aaPredicted RBP16.23■□□□□ 0.19
HOXC11-201ENST00000243082 NME2P1O60361 137 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 DBHP09172 617 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 CST2P09228 141 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 RAB6AP20340 208 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 NME2P22392 152 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 QRFPP83859 136 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 SRYQ05066 204 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 SLC25A25Q6KCM7 469 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 PGAP1Q75T13 922 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 PAIP2BQ9ULR5 123 aaKnown RBP16.23■□□□□ 0.19
HOXC11-201ENST00000243082 FLVCR2Q9UPI3 526 aa16.23■□□□□ 0.19
HOXC11-201ENST00000243082 A0A0U1RQV5 110 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 A6NL46 340 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 ZNF708P17019 499 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 SLC6A9P48067 706 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 PCGF3Q3KNV8 242 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 MOGAT2Q3SYC2 334 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 RIPPLY2Q5TAB7 128 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 ZNF627Q7L945 461 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.22■□□□□ 0.19
HOXC11-201ENST00000243082 NOXA1Q86UR1 476 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 GPX8Q8TED1 209 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 TMEM45BQ96B21 275 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 RAB22AQ9UL26 194 aa16.22■□□□□ 0.19
HOXC11-201ENST00000243082 IGKV3D-15A0A087WSY6 115 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 A0A0A6YYH2 397 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 A6NJ64 397 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 ARGFXA6NJG6 315 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 M0R135 149 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 ERCC1P07992 297 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-201ENST00000243082 ZNF93P35789 620 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-201ENST00000243082 MEOX1P50221 254 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 PLGLB1Q02325 96 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 PMPCAQ10713 525 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 UNC119Q13432 240 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 DEDD2Q8WXF8 326 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 ZNF799Q96GE5 643 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 OR51J1Q9H342 316 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 GPR35Q9HC97 309 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 NKIRAS2Q9NYR9 191 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 KLF13Q9Y2Y9 288 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-201ENST00000243082 RTTNQ86VV8 2226 aa16.21■□□□□ 0.19
HOXC11-201ENST00000243082 MEIS3P1A6NDR6 274 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 BPNT1O95861 308 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 CSF1P09603 554 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 VSIG8P0DPA2 414 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 B4GALT1P15291 398 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 CRYGSP22914 178 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 TCF15Q12870 199 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 FCN2Q15485 313 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 HYAL4Q2M3T9 481 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 CEACAM16Q2WEN9 425 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 LINC00303Q3SY05 128 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 PLXDC2Q6UX71 529 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 GIMAP1Q8WWP7 306 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 ITFG2Q969R8 447 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 SEH1LQ96EE3 360 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 SPACA5Q96QH8 159 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 FOXB1Q99853 325 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 MED28Q9H204 178 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 ING3Q9NXR8 418 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 TAS2R8Q9NYW2 309 aa16.21■□□□□ 0.18
HOXC11-201ENST00000243082 SGCEO43556 437 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 SYNGR3O43761 229 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 APOC1P02654 83 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 ITGB2P05107 769 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 IFITM2Q01629 132 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 RAB35Q15286 201 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 ST3GAL2Q16842 350 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 Q6ZSR3 168 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 ANGPTL5Q86XS5 388 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 SPTSSAQ969W0 71 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 OR10A4Q9H209 315 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 ASCL3Q9NQ33 180 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 PAQR5Q9NXK6 330 aaPredicted RBP16.2■□□□□ 0.18
HOXC11-201ENST00000243082 V9GYS6 101 aa16.2■□□□□ 0.18
HOXC11-201ENST00000243082 IGKV1-9A0A0C4DH69 117 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 WIPF3A6NGB9 483 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 KLRC4-KLRK1H3BQV0 150 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 SULT1C2O00338 296 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 CDK2AP1O14519 115 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 PEX14O75381 377 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 SOX8P57073 446 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 SSBP1Q04837 148 aaKnown RBP16.19■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF774Q6NX45 483 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 CDH26Q8IXH8 852 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 OR4C16Q8NGL9 310 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 SSC4DQ8WTU2 575 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 FBLN5Q9UBX5 448 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 ELF5Q9UKW6 265 aaPredicted RBP16.19■□□□□ 0.18
HOXC11-201ENST00000243082 CELSR3Q9NYQ7 3312 aa16.19■□□□□ 0.18
HOXC11-201ENST00000243082 RAB27BO00194 218 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms