RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 OR5V1Q9UGF6 321 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 TUBD1Q9UJT1 453 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 A0A0B4J203 849 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 MBD3L4A6NDZ8 208 aaPredicted RBP20.76■□□□□ 0.91
RRP9-201ENST00000232888 MBD3L3A6NE82 208 aaPredicted RBP20.76■□□□□ 0.91
RRP9-201ENST00000232888 MBD3L5A6NJ08 208 aaPredicted RBP20.76■□□□□ 0.91
RRP9-201ENST00000232888 DHRS3O75911 302 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 TPPPO94811 219 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 RAB3AP20336 220 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 FOXG1P55316 489 aaPredicted RBP20.76■□□□□ 0.91
RRP9-201ENST00000232888 C1orf100Q5SVJ3 147 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 C9orf135Q5VTT2 229 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 PYHIN1Q6K0P9 492 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 ZNF585AQ6P3V2 769 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 OR6M1Q8NGM8 313 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 MBD3L2Q8NHZ7 208 aaPredicted RBP20.76■□□□□ 0.91
RRP9-201ENST00000232888 ITFG2Q969R8 447 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 FAM71F1Q96KD3 344 aaPredicted RBP20.76■□□□□ 0.91
RRP9-201ENST00000232888 OCEL1Q9H607 264 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 RAXQ9Y2V3 346 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 V9GYS6 101 aa20.76■□□□□ 0.91
RRP9-201ENST00000232888 A0A096LPE4 126 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 A0A1W2PPZ6 126 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 LMX1BO60663 402 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 IL18BPO95998 194 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 ITGA5P08648 1049 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 PITPNAQ00169 270 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 SCN1BQ07699 218 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 OXA1LQ15070 435 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 DCDC5Q6ZRR9 648 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 CENPSQ8N2Z9 138 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 ZFP3Q96NJ6 502 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 PLEKHA1Q9HB21 404 aa20.75■□□□□ 0.91
RRP9-201ENST00000232888 FIGNL2A6NMB9 653 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 ALX3O95076 343 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 SLC34A2O95436 690 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 IL7P13232 177 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 HOXB1P14653 301 aaPredicted RBP20.74■□□□□ 0.91
RRP9-201ENST00000232888 AZGP1P25311 298 aaKnown RBP20.74■□□□□ 0.91
RRP9-201ENST00000232888 THBS4P35443 961 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 KIR2DL2P43627 348 aaPredicted RBP20.74■□□□□ 0.91
RRP9-201ENST00000232888 ART1P52961 327 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 PLP2Q04941 152 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 TRIM16LQ309B1 348 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 Q6ZT83 130 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 BOD1Q96IK1 185 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 LYZL4Q96KX0 146 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 UQCC2Q9BRT2 126 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 SPTBN2O15020 2390 aa20.74■□□□□ 0.91
RRP9-201ENST00000232888 LCATP04180 440 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 BAK1Q16611 211 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 LYPD6Q86Y78 171 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 GCNT2Q8N0V5 402 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 Q8N402 240 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 CPEB3Q8NE35 698 aaKnown RBP20.73■□□□□ 0.91
RRP9-201ENST00000232888 PP6455Q8WZ26 134 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 SGK3Q96BR1 496 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 S100A16Q96FQ6 103 aaKnown RBP20.73■□□□□ 0.91
RRP9-201ENST00000232888 SORCS2Q96PQ0 1159 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 C1QTNF5Q9BXJ0 243 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 PLSCR4Q9NRQ2 329 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 C14orf119Q9NWQ9 140 aa20.73■□□□□ 0.91
RRP9-201ENST00000232888 URB1O60287 2271 aaKnown RBP20.72■□□□□ 0.91
RRP9-201ENST00000232888 LOC100289279A0A1B0GTE1 492 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 E9PLN8 166 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 SULT1B1O43704 296 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 PTTG1O95997 202 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 HLA-HP01893 362 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 ALDOBP05062 364 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 CSF3P09919 207 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 HTR2CP28335 458 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 ID4P47928 161 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 CLDN12P56749 244 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 RAB1AP62820 205 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 SPOCK1Q08629 439 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 P2RY14Q15391 338 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 SFRP5Q5T4F7 317 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 CMTM4Q8IZR5 234 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 POC5Q8NA72 575 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 OR51A2Q8NGJ7 313 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 C15orf40Q8WUR7 153 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 FAM3DQ96BQ1 224 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 ACACAQ13085 2346 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 XRCC2O43543 280 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 HLA-DQB1P01920 261 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 CD79AP11912 226 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 HOXD11P31277 338 aaPredicted RBP20.72■□□□□ 0.91
RRP9-201ENST00000232888 GFOD2Q3B7J2 385 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 SNAI3Q3KNW1 292 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 GLYATL3Q5SZD4 288 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 COLCA1Q6ZS62 124 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 UTS2BQ765I0 119 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 CNEP1R1Q8N9A8 125 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 FAM57AQ8TBR7 257 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 AKAP1Q92667 903 aaKnown RBP eCLIP20.72■□□□□ 0.91
RRP9-201ENST00000232888 SLC25A28Q96A46 364 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 HAVCR1Q96D42 359 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 SLC25A38Q96DW6 304 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 COX4I2Q96KJ9 171 aa20.72■□□□□ 0.91
RRP9-201ENST00000232888 METTL17Q9H7H0 456 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms