RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 A0A0B4J2A0 478 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 C9orf170A2RU37 121 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 CEACAM18A8MTB9 384 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 ZNF264O43296 627 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 DUS4LO95620 317 aaKnown RBP18.3■□□□□ 0.52
SNX3-201ENST00000230085 PRKXP51817 358 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 CYCSP99999 105 aaKnown RBP18.3■□□□□ 0.52
SNX3-201ENST00000230085 LDLRAD3Q86YD5 345 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 ZNF584Q8IVC4 421 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 SPAG16Q8N0X2 631 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 INO80EQ8NBZ0 244 aaPredicted RBP18.3■□□□□ 0.52
SNX3-201ENST00000230085 ARL11Q969Q4 196 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 DGAT2Q96PD7 388 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 SEC11CQ9BY50 192 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 LAT2Q9GZY6 243 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 SYT4Q9H2B2 425 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 ZNF629Q9UEG4 869 aaPredicted RBP18.3■□□□□ 0.52
SNX3-201ENST00000230085 SHPKQ9UHJ6 478 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 OR10H1Q9Y4A9 318 aa18.3■□□□□ 0.52
SNX3-201ENST00000230085 IGLV1-36A0A0B4J1U3 117 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 A0A1B0GX78 115 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 STMND1H3BQB6 276 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 HRKO00198 91 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 ALOX12BO75342 701 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 F13BP05160 661 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 TPT1P13693 172 aaKnown RBP18.29■□□□□ 0.52
SNX3-201ENST00000230085 SLC6A9P48067 706 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 CX3CR1P49238 355 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 TAS2R31P59538 309 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 CXADRP78310 365 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 LCN10Q6JVE6 187 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 TMED4Q7Z7H5 227 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 SKA3Q8IX90 412 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 OR8K3Q8NH51 312 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 NUDT9Q9BW91 350 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 BIN3Q9NQY0 253 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 COA4Q9NYJ1 87 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 RAB22AQ9UL26 194 aa18.29■□□□□ 0.52
SNX3-201ENST00000230085 A0A0A6YYC8 382 aaPredicted RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 PRSS37A4D1T9 235 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 MEIS3P1A6NDR6 274 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 I3L1I5 382 aaPredicted RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 M0QYG6 137 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 IFNA4P05014 189 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 CRHP06850 196 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 OR1D4P47884 311 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 RAB13P51153 203 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 ATP1B3P54709 279 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 HSD17B7P56937 341 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 CD226Q15762 336 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 ZNF260Q3ZCT1 412 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 GLYATL3Q5SZD4 288 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 ZNF385CQ66K41 422 aaPredicted RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 AWAT2Q6E213 333 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 C6orf15Q6UXA7 325 aaPredicted RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 MED25Q71SY5 747 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 PAQR4Q8N4S7 273 aaPredicted RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 C10orf53Q8N6V4 93 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 OR1M1Q8NGA1 313 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 OR9A4Q8NGU2 314 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 MRGPRFQ96AM1 343 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 PDCD10Q9BUL8 212 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 MMP26Q9NRE1 261 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 PRTFDC1Q9NRG1 225 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 ANAPC10Q9UM13 185 aa18.28■□□□□ 0.52
SNX3-201ENST00000230085 MRPS18BQ9Y676 258 aaKnown RBP18.28■□□□□ 0.52
SNX3-201ENST00000230085 CLDN4O14493 209 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 SNAPINO95295 136 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 PNPP00491 289 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 KLK3P07288 261 aaPredicted RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 ADCYAP1P18509 176 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 CD82P27701 267 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 RIDAP52758 137 aaKnown RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 TAF13Q15543 124 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 TGIF1Q15583 401 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 SGCBQ16585 318 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 RNASE10Q5GAN6 216 aaKnown RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 DEGS2Q6QHC5 323 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 DTX1Q86Y01 620 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 LILRB1Q8NHL6 650 aaPredicted RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 RNF141Q8WVD5 230 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 KTI12Q96EK9 354 aaPredicted RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 MMABQ96EY8 250 aaPredicted RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 SAV1Q9H4B6 383 aaPredicted RBP18.27■□□□□ 0.52
SNX3-201ENST00000230085 MLXQ9UH92 298 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 HHLA2Q9UM44 414 aa18.27■□□□□ 0.52
SNX3-201ENST00000230085 TRAV36DV7A0A075B6V5 113 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 METTL21EPA6NDL7 271 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 C1QTNF9BB2RNN3 333 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 XKRYO14609 159 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 C1QTNF9P0C862 333 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 PGDP52209 483 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 GUCA2BQ16661 112 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 PCK2Q16822 640 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 HAGHLQ6PII5 290 aaPredicted RBP18.27■□□□□ 0.51
SNX3-201ENST00000230085 TAAR8Q969N4 342 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 SAT2Q96F10 170 aaPredicted RBP18.27■□□□□ 0.51
SNX3-201ENST00000230085 CST11Q9H112 138 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 MRPL22Q9NWU5 206 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms