RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 THSD7AQ9UPZ6 1657 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 LINC01553A4QN01 128 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 F6UZH7 168 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 HOXC8P31273 242 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 AGBL4Q5VU57 503 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 KLHDC1Q8N7A1 406 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 CNRIP1Q96F85 164 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 VAMP8Q9BV40 100 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 GHITMQ9H3K2 345 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 UCK1Q9HA47 277 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 SIGLEC7Q9Y286 467 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 WNT11O96014 354 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 GSK3AP49840 483 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 TPPP2P59282 170 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 TMPRSS11FQ6ZWK6 438 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 SMIM15Q7Z3B0 74 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF784Q8NCA9 323 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 NANOS1Q8WY41 292 aaKnown RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 SLAMF6Q96DU3 332 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 FAM210BQ96KR6 192 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 SPACA5Q96QH8 159 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 KCND3Q9UK17 655 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 KCNE3Q9Y6H6 103 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF320A2RRD8 509 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 M0R143 59 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ZFPL1O95159 310 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 APLNRP35414 380 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 PIGPP57054 158 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 SELENOVP59797 346 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 EEF1A1P68104 462 aaKnown RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 GCNT2Q8N0V5 402 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 MOB1AQ9H8S9 216 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 DNAJB11Q9UBS4 358 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 WSB1Q9Y6I7 421 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 MFSD2BA6NFX1 497 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 K7ESM1 405 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 PXNP49023 591 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ING1Q9UK53 422 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 RCL1Q9Y2P8 373 aaKnown RBP12.5□□□□□ -0.41
HCFC2-201ENST00000229330 ARG1P05089 322 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 OR5H8P0DN80 308 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 FPR2P25090 351 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 AARDQ4LEZ3 155 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 C10orf111Q8N326 155 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 MEGF10Q96KG7 1140 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 HHIPQ96QV1 700 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 SEMA6CQ9H3T2 930 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 CD96P40200 585 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 RPL29P47914 159 aaKnown RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 TMEM176BQ3YBM2 270 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 SLC25A30Q5SVS4 291 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 ADIPOR2Q86V24 386 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 OR4C5Q8NGB2 326 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 RARRES3Q9UL19 164 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 RAB32Q13637 225 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 PNLIPRP3Q17RR3 467 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 TMEM52BQ4KMG9 183 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 TOMM20LQ6UXN7 152 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 PLPP6Q8IY26 295 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 RTN4IP1Q8WWV3 396 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 TOE1Q96GM8 510 aaKnown RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 PLEKHF2Q9H8W4 249 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 TMEM272A0A1B0GTI8 110 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 SFT2D2O95562 160 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 DUS4LO95620 317 aaKnown RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 CXCL2P19875 107 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 NTF3P20783 257 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 MLF1P58340 268 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 DMKNQ6E0U4 476 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-201ENST00000229330 OR52N5Q8NH56 324 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 PLXDC2Q6UX71 529 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 PPP1R35Q8TAP8 253 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 NUBPLQ8TB37 319 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 ZDHHC11Q9H8X9 412 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 RASL12Q9NYN1 266 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 CTSFQ9UBX1 484 aa12.49□□□□□ -0.41
HCFC2-201ENST00000229330 NSG1A0A0A6YYJ2 146 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF816-ZNF321PA0A0X1KG74 233 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 C7orf77A4D0Y5 90 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ANKUB1A6NFN9 424 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms