RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 GLYATL3Q5SZD4 288 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 PRAMEF6Q5VXH4 476 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 DRAM2Q6UX65 266 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 ERI1Q8IV48 349 aaKnown RBP11.95□□□□□ -0.5
GPN3-201ENST00000228827 OR6N2Q8NGY6 317 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 DVL3Q92997 716 aaPredicted RBP11.95□□□□□ -0.5
GPN3-201ENST00000228827 SLC7A6OSQ96CW6 309 aaPredicted RBP11.95□□□□□ -0.5
GPN3-201ENST00000228827 OR51V1Q9H2C8 321 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 ARRDC5A6NEK1 342 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 GGT3PA6NGU5 568 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 CD300LBA8K4G0 201 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 CEACAM18A8MTB9 384 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 J3QLI3 93 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 IFNL4K9M1U5 179 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 FKBP6O75344 327 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 VENTXO95231 258 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 EPHA1P21709 976 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 GSTT1P30711 240 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
GPN3-201ENST00000228827 RAD23AP54725 363 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 GINS1Q14691 196 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 OR8G1Q15617 311 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 PCK2Q16822 640 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 TEX30Q5JUR7 227 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 LINC01590Q5TEZ4 76 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 DPY19L4Q7Z388 723 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 C1QL2Q7Z5L3 287 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 INTS14Q96SY0 518 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 KCNJ15Q99712 375 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 MMP26Q9NRE1 261 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 UFSP2Q9NUQ7 469 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 OPN4Q9UHM6 478 aa11.95□□□□□ -0.5
GPN3-201ENST00000228827 LRRC30A6NM36 301 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 ZNF878C9JN71 531 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 F5H0A9 414 aaPredicted RBP11.94□□□□□ -0.5
GPN3-201ENST00000228827 TBX1O43435 398 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 DNAJC8O75937 253 aaPredicted RBP11.94□□□□□ -0.5
GPN3-201ENST00000228827 ANXA2P07355 339 aaKnown RBP11.94□□□□□ -0.5
GPN3-201ENST00000228827 GATA3P23771 443 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 HSD11B1P28845 292 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 CX3CR1P49238 355 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 BLVRAP53004 296 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 SCGB2A2Q13296 93 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 MAB21L1Q13394 359 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 PLBD1Q6P4A8 553 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
GPN3-201ENST00000228827 TEX29Q8N6K0 151 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 C19orf18Q8NEA5 215 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 ZMYND19Q96E35 227 aaPredicted RBP11.94□□□□□ -0.5
GPN3-201ENST00000228827 ADAT1Q9BUB4 502 aaKnown RBP11.94□□□□□ -0.5
GPN3-201ENST00000228827 ZNF556Q9HAH1 456 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 DNAJC27Q9NZQ0 273 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 POMPQ9Y244 141 aa11.94□□□□□ -0.5
GPN3-201ENST00000228827 A0A1B0GWJ7 208 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 TCRBV3S1A0A5B6 114 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 PRR23D1E9PI22 279 aaPredicted RBP11.93□□□□□ -0.5
GPN3-201ENST00000228827 TRAPPC2LH3BP13 241 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 FAM20BO75063 409 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 GLCEO94923 617 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 PRR23D2P0DMB1 279 aaPredicted RBP11.93□□□□□ -0.5
GPN3-201ENST00000228827 OSMP13725 252 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 IRF2P14316 349 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 RPS2P15880 293 aaKnown RBP11.93□□□□□ -0.5
GPN3-201ENST00000228827 PAICSP22234 425 aaKnown RBP11.93□□□□□ -0.5
GPN3-201ENST00000228827 CD200P41217 278 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 HOXA4Q00056 320 aaPredicted RBP11.93□□□□□ -0.5
GPN3-201ENST00000228827 MPPED2Q15777 294 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 KLHL12Q53G59 568 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 OR56B2PQ8NGI1 322 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 ZNF418Q8TF45 676 aaPredicted RBP11.93□□□□□ -0.5
GPN3-201ENST00000228827 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 AMELYQ99218 206 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 TMEM246Q9BRR3 403 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 ABHD6Q9BV23 337 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 YY1AP1Q9H869 796 aa11.93□□□□□ -0.5
GPN3-201ENST00000228827 PPIAL4EA0A075B759 164 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 PPIAL4DF5H284 164 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 PPIAL4FP0DN26 164 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 GATA4P43694 442 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 SLC15A1P46059 708 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
GPN3-201ENST00000228827 GFOD2Q3B7J2 385 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 TMEM236Q5W0B7 351 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 CELF2-AS1Q8N7Q2 184 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.92□□□□□ -0.5
GPN3-201ENST00000228827 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
GPN3-201ENST00000228827 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 OR11L1Q8NGX0 322 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 SLC6A7Q99884 636 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 CADM1Q9BY67 442 aaKnown RBP11.92□□□□□ -0.5
GPN3-201ENST00000228827 BRD7Q9NPI1 651 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 DNAJB9Q9UBS3 223 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 PPIAL4AQ9Y536 164 aa11.92□□□□□ -0.5
GPN3-201ENST00000228827 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
GPN3-201ENST00000228827 GSC2O15499 205 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms