RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ELK1P19419 428 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 RNPS1Q15287 305 aaKnown RBP16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ALKAL2Q6UX46 152 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 TMEM200AQ86VY9 491 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 SFTPA2Q8IWL1 248 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ZG16BQ96DA0 208 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 LRFN5Q96NI6 719 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 SLC39A9Q9NUM3 307 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ONECUT1Q9UBC0 465 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF391Q9UJN7 358 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 GALNSP34059 522 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 OR2T2Q6IF00 324 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 NCCRP1Q6ZVX7 275 aaPredicted RBP16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF767PQ75MW2 155 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 OR2Y1Q8NGV0 311 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 APOBEC3DQ96AK3 386 aaPredicted RBP16.6■□□□□ 0.25
CLIP2-201ENST00000223398 CNTNAP3Q9BZ76 1288 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 RBFOX1Q9NWB1 397 aaKnown RBP16.6■□□□□ 0.25
CLIP2-201ENST00000223398 EPHA2P29317 976 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 OR52I2Q8NH67 350 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF486Q96H40 463 aaPredicted RBP16.6■□□□□ 0.25
CLIP2-201ENST00000223398 JAM3Q9BX67 310 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 FXYD1O00168 92 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 SNRNP70P08621 437 aaKnown RBP16.6■□□□□ 0.25
CLIP2-201ENST00000223398 CNR1P21554 472 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 TESK1Q15569 626 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
CLIP2-201ENST00000223398 ZNF816-ZNF321PA0A0X1KG74 233 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 PPIHO43447 177 aaKnown RBP16.59■□□□□ 0.25
CLIP2-201ENST00000223398 AQP6Q13520 282 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 OR2AE1Q8NHA4 323 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 UHRF2Q96PU4 802 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 S1PR3Q99500 378 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 SLC25A19Q9HC21 320 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 MMP25Q9NPA2 562 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 CRYM-AS1A6NIL9 109 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 RAF1P04049 648 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 RAC1P63000 192 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 UBALD1Q8TB05 177 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 GABARAPL1Q9H0R8 117 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 PDCD1Q15116 288 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 CDONQ4KMG0 1287 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 ADAT1Q9BUB4 502 aaKnown RBP16.59■□□□□ 0.25
CLIP2-201ENST00000223398 KCNE1BA0A087WTH5 132 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 GMDSO60547 372 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 TMIGD3P0DMS9 266 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-201ENST00000223398 PI3P19957 117 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 DUSP1P28562 367 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 PEA15Q15121 130 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 SMIM21Q3B7S5 101 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 ARHGDIGQ99819 225 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 FN3KRPQ9HA64 309 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 MBD1Q9UIS9 605 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-201ENST00000223398 COL4A1P02462 1669 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 PATE4P0C8F1 98 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 RAB4AP20338 218 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 SLC35A2P78381 396 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 RTL8BQ17RB0 113 aa16.59■□□□□ 0.25
CLIP2-201ENST00000223398 WDR74Q6RFH5 385 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-201ENST00000223398 PCNPQ8WW12 178 aaKnown RBP16.59■□□□□ 0.25
CLIP2-201ENST00000223398 A0A0B4J2E0 115 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 A0A1B0GX12 115 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 C2orf76Q3KRA6 126 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 CCL17Q92583 94 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 SEH1LQ96EE3 360 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 PLK3Q9H4B4 646 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 C20orf141Q9NUB4 165 aa16.58■□□□□ 0.25
CLIP2-201ENST00000223398 GPX5O75715 221 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 SULT1C4O75897 302 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 ARL16Q0P5N6 197 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 SCGB2A2Q13296 93 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 CBLN3Q6UW01 205 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 PLPP5Q8NEB5 264 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 GPATCH2Q9NW75 528 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 DNAJB12Q9NXW2 375 aaKnown RBP16.58■□□□□ 0.24
CLIP2-201ENST00000223398 SCAF4O95104 1147 aaKnown RBP16.58■□□□□ 0.24
CLIP2-201ENST00000223398 HLA-HP01893 362 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 NPBWR1P48145 328 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 CDK5R1Q15078 307 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 TIGD3Q6B0B8 471 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 JMJD6Q6NYC1 403 aaPredicted RBP16.58■□□□□ 0.24
CLIP2-201ENST00000223398 OR5H15A6NDH6 313 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 OR1S2Q8NGQ3 325 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 OR6K3Q8NGY3 331 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 OR2G2Q8NGZ5 317 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 CMTM2Q8TAZ6 248 aa16.58■□□□□ 0.24
CLIP2-201ENST00000223398 SMLR1H3BR10 107 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 AIPO00170 330 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 RER1O15258 196 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 CLN5O75503 358 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 TGM6O95932 706 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 TNFRSF1AP19438 455 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 TGFBR1P36897 503 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 ELLP55199 621 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-201ENST00000223398 SSX2Q16385 188 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 STPG1Q5TH74 334 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 RIMKLAQ8IXN7 391 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 CELF2-AS1Q8N7Q2 184 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 SMIM19Q96E16 107 aa16.57■□□□□ 0.24
CLIP2-201ENST00000223398 TOX3O15405 576 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms