RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 CCDC28AQ8IWP9 274 aa13.18□□□□□ -0.3
TRMT1-201ENST00000221504 C12orf45Q8N5I9 185 aaPredicted RBP13.18□□□□□ -0.3
TRMT1-201ENST00000221504 SOX7Q9BT81 388 aa13.18□□□□□ -0.3
TRMT1-201ENST00000221504 ZNF319Q9P2F9 582 aa13.18□□□□□ -0.3
TRMT1-201ENST00000221504 HS3ST3B1Q9Y662 390 aa13.18□□□□□ -0.3
TRMT1-201ENST00000221504 WDFY3Q8IZQ1 3526 aa13.18□□□□□ -0.3
TRMT1-201ENST00000221504 FXYD6-FXYD2A0A087WZ82 144 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 TUBAL3A6NHL2 446 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 C9J4A7 227 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 CSN2P05814 226 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 CCL3P10147 92 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 CCL4P13236 92 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 ANOS1P23352 680 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRMT1-201ENST00000221504 NKPD1Q17RQ9 610 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 COMMD7Q86VX2 200 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 OR5AS1Q8N127 324 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 NUDCD2Q8WVJ2 157 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 PRRT1Q99946 306 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 NUDT16L1Q9BRJ7 211 aaKnown RBP13.17□□□□□ -0.3
TRMT1-201ENST00000221504 ANGPTL4Q9BY76 406 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 FXYD6Q9H0Q3 95 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 OR14I1A6ND48 311 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 NR2C1P13056 603 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 CCL1P22362 96 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 GSK3AP49840 483 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 GMFBP60983 142 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
TRMT1-201ENST00000221504 HLXQ14774 488 aaPredicted RBP13.17□□□□□ -0.3
TRMT1-201ENST00000221504 NHLRC3Q5JS37 347 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 M1APQ8TC57 530 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 FAM71F1Q96KD3 344 aaPredicted RBP13.17□□□□□ -0.3
TRMT1-201ENST00000221504 GNRHR2Q96P88 292 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
TRMT1-201ENST00000221504 NCOA6Q14686 2063 aaPredicted RBP13.16□□□□□ -0.3
TRMT1-201ENST00000221504 TEX51A0A1B0GUA7 166 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 PATE3B3GLJ2 98 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 CRYZL1O95825 349 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 LIFP15018 202 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 GNB3P16520 340 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 ZNF17P17021 662 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 MPZP25189 248 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 SSR4P51571 173 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
TRMT1-201ENST00000221504 ZFP36L1Q07352 338 aaKnown RBP13.16□□□□□ -0.3
TRMT1-201ENST00000221504 DHRS2Q13268 280 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 ZMYND11Q15326 602 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 RAET1LQ5VY80 246 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 TMUB2Q71RG4 321 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 FAM57BQ71RH2 274 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 RNF144BQ7Z419 303 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 CD163Q86VB7 1156 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 ZNF101Q8IZC7 436 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 ZNF283Q8N7M2 679 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 ZNF416Q9BWM5 594 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
TRMT1-201ENST00000221504 MRPS28Q9Y2Q9 187 aaKnown RBP13.16□□□□□ -0.3
TRMT1-201ENST00000221504 RP2O75695 350 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 RRASP10301 218 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 DSCR4P56555 118 aaPredicted RBP13.15□□□□□ -0.3
TRMT1-201ENST00000221504 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
TRMT1-201ENST00000221504 CXADRP78310 365 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 CLVS2Q5SYC1 327 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 PEAR1Q5VY43 1037 aaPredicted RBP13.15□□□□□ -0.3
TRMT1-201ENST00000221504 OR52W1Q6IF63 320 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 C17orf107Q6ZR85 190 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 RFPL4BQ6ZWI9 263 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 DOK3Q7L591 496 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 OR2W3Q7Z3T1 314 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 OR2Y1Q8NGV0 311 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 PAQR8Q8TEZ7 354 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 SELENOIQ9C0D9 397 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 ARL6Q9H0F7 186 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 VSIG4Q9Y279 399 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
TRMT1-201ENST00000221504 PPP3CBP16298 524 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 DUSP3P51452 185 aaPredicted RBP13.15□□□□□ -0.3
TRMT1-201ENST00000221504 SORDQ00796 357 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 MC2RQ01718 297 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 SGCAQ16586 387 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 SFRP5Q5T4F7 317 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 GLIPR1L1Q6UWM5 242 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 DTWD2Q8NBA8 298 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 NTNG2Q96CW9 530 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 C1orf147Q96MC9 270 aaPredicted RBP13.15□□□□□ -0.3
TRMT1-201ENST00000221504 NICN1Q9BSH3 213 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 LPAR5Q9H1C0 372 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 SH2D2AQ9NP31 389 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 KIF25Q9UIL4 384 aa13.15□□□□□ -0.3
TRMT1-201ENST00000221504 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms