RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PLEK2Q9NYT0 353 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 CGGBP1Q9UFW8 167 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 TIMM10BQ9Y5J6 103 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 A0A0B4J293 547 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 OR6C6A6NF89 314 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 NAP1L6A6NFF2 107 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF891A8MT65 544 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 M0R135 149 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 ALDOBP05062 364 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 ITGB2P05107 769 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 TMIGD3P0DMS9 266 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 GNALP38405 381 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 SRP9P49458 86 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 TPTEP56180 551 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 CLN3Q13286 438 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 OR52H1Q8NGJ2 320 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 OR1F12Q8NHA8 337 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF799Q96GE5 643 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 DPAGT1Q9H3H5 408 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 V9GYS6 101 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 CNTRLQ7Z7A1 2325 aa12.55□□□□□ -0.4
RTFDC1-201ENST00000023939 TRGV5A0A0B4J1U4 118 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 CEACAM4O75871 244 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 BPNT1O95861 308 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 GSTT2BP0CG30 244 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 ANOS1P23352 680 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 SNTB2Q13425 540 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 CARTPTQ16568 116 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 RNFT1Q5M7Z0 435 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 TSPO2Q5TGU0 170 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 BIVMQ86UB2 503 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 GLCCI1Q86VQ1 547 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OR5AS1Q8N127 324 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OR52N4Q8NGI2 321 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 WDYHV1Q96HA8 205 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 LYZL4Q96KX0 146 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 EXO5Q9H790 373 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 ANKRD20A5PA0PJZ0 165 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 DHRS7CA6NNS2 312 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 E9PLN8 166 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 F5H5K5 113 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 INMT-MINDY4F8WBC2 141 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 DHRS3O75911 302 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 IGHG3P01860 377 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 YES1P07947 543 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 B4GALT1P15291 398 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF32P17041 273 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 THBS4P35443 961 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 CCL11P51671 97 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 RAG2P55895 527 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 QRFPP83859 136 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 SSBP1Q04837 148 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 TATDN3Q17R31 274 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OLFML2AQ68BL7 652 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 COMMD2Q86X83 199 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OR4D6Q8NGJ1 314 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OR13C9Q8NGT0 318 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 FNDC9Q8TBE3 224 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 SSC4DQ8WTU2 575 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 SOX7Q9BT81 388 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OR2H1Q9GZK4 316 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 CNTD2Q9H8S5 307 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 RAB22AQ9UL26 194 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 LIPGQ9Y5X9 500 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 NUBP2Q9Y5Y2 271 aa12.54□□□□□ -0.4
RTFDC1-201ENST00000023939 H7C417 338 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 SULT1C2O00338 296 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 FARS2O95363 451 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 MMP7P09237 267 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 ABOP16442 354 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 SLC6A9P48067 706 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 UTS2BQ765I0 119 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 CHMP1BQ7LBR1 199 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 SLC16A14Q7RTX9 510 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 CDH24Q86UP0 819 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 NAA40Q86UY6 237 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 TUSC5Q8IXB3 177 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 OR6F1Q8NGZ6 308 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 FAM122AQ96E09 287 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 PRRG4Q9BZD6 226 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 WNT5BQ9H1J7 359 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 ATG5Q9H1Y0 275 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 TAS2R8Q9NYW2 309 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF391Q9UJN7 358 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF175Q9Y473 711 aa12.53□□□□□ -0.4
RTFDC1-201ENST00000023939 TRAV17A0A0B4J275 112 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 C5orf63A6NC05 138 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 MTRF1O75570 445 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 CCNKO75909 580 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 TCRBP04435 133 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms