RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tmem25Q9DCF1 365 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Sdf2Q9DCT5 211 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Bap18Q9DCT6 171 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm17087V9GXQ2 156 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Obp1bA2AEP0 171 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm14743A2BHD2 171 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr424E9Q0Q2 315 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Zfp870J3QMA4 560 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn1r94K7N6X3 305 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pmm1O35621 262 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Mbl2P41317 244 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ucp2P70406 309 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Smn1P97801 288 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Lyg2Q3V1I0 213 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm527Q4KL13 310 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 OmgQ63912 440 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pptc7Q6NVE9 310 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1166Q7TR27 316 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Slc25a44Q8BGF9 314 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 OacylQ8BML2 685 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 CenpvQ9CXS4 252 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Med29Q9DB91 199 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Rgs21V9GXQ3 152 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Lipo5F6QKH6 233 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm5798F7BTS7 198 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Dpp4P28843 760 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 CtgfP29268 348 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 ElocP83940 112 aaKnown RBP8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 MplQ08351 625 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cyb561a3Q6P1H1 242 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Creg2Q8BGC9 288 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Lhfpl6Q8BM86 200 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Amdhd2Q8JZV7 409 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn1r208Q8R275 308 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Nop16Q9CPT5 178 aaKnown RBP8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ssna1Q9JJ94 119 aa8.81□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn2r80E9Q1L0 863 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm6803J3QPI8 144 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 FaimlJ3QPY3 178 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm2056J3QQ02 144 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 H2al1oL7MU04 110 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 IghgP01863 330 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Bpifa2P07743 235 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tcte3P11985 191 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Crisp2P16563 243 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Slc6a1P31648 599 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tmem14aP56983 99 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Q149G0 166 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr733Q14AK5 308 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Acsf3Q3URE1 583 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 SrmQ64674 302 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 P4ha3Q6W3F0 542 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gemin8Q8BHE1 238 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Lmf2Q8C3X8 702 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pars2Q8CFI5 475 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 SbsnQ8CIT9 700 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Crb3Q8QZT4 113 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pink1Q99MQ3 580 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Glipr2Q9CYL5 154 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Twsg1Q9EP52 222 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Sorcs2Q9EPR5 1159 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 SncgQ9Z0F7 123 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Clec4dQ9Z2H6 219 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Phf3B2RQG2 2025 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm21767J3QPV5 180 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ascl4M0QW46 144 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ear3O35290 156 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 PipP02816 146 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 PlgP20918 812 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ypel5P62700 121 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gpr55Q3UJF0 327 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Nufip2Q5F2E7 692 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 SrmsQ62270 496 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 LcorQ6ZPI3 433 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Eml2Q7TNG5 649 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1229Q7TQZ9 311 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr884Q7TRE1 309 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Rtp2Q80ZI2 223 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cdhr3Q8BL00 831 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Fam120cQ8C3F2 1091 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn1r229Q8R2A9 306 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr732Q8VFT5 308 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Letmd1Q924L1 360 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cep41Q99NF3 373 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Eef1akmt1Q9CY45 214 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Rrp8Q9DB85 457 aaKnown RBP8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cml5Q9QXS8 227 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ighv1-13A0A075B5I0 98 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 AgmatA2AS89 358 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1055A2AVX9 346 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Stpg3A2RSX4 306 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm20715E9Q3L7 95 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Hoxb5P09079 269 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Igsf6P0C6B7 237 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 ArsgQ3TYD4 525 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 1700057G04RikQ3V0U0 232 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Fam199xQ8K2D0 388 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 CcnqQ8QZR8 250 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1309Q8VF83 320 aa8.8□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr970Q8VFN3 311 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms