RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Zp3P10761 424 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc2a1P17809 492 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Nkx2-1P50220 372 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Otx2P80206 289 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fam196aQ3USH1 422 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 ShhQ62226 437 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Paqr9Q6TCG2 375 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Spaca7Q9D2S4 182 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 St8sia2O35696 375 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 PomcP01193 235 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Fkbp2P45878 140 aaKnown RBP21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ptx3P48759 381 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Nrg2P56974 756 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Eif4eP63073 217 aaKnown RBP21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Gm773Q3TML4 206 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ugt8Q64676 541 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 LcorQ6ZPI3 433 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Vmn1r37Q8R2E4 302 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Adad2Q9D5P4 478 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Ceacam13Q9DAT7 263 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Emc7Q9EP72 241 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Scamp2Q9ERN0 329 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Vmn1r168K7N6B6 309 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr13P34984 310 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Tas2r113Q7M711 309 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Trib3Q8K4K2 354 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc25a30Q9CR58 291 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc35a4Q9D321 324 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr209L7N1X3 305 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Adh1P00329 375 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr1357Q7TQU7 313 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Abhd14bQ8VCR7 210 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 B3gnt9Q8VI16 399 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Bbc3Q99ML1 193 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Plxdc2Q9DC11 530 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Gm5475D3YV11 175 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr173E9QAT7 321 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Tnfaip3Q60769 775 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Tle1Q62440 770 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 ErasQ7TN89 227 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Tmem242Q8VCR3 140 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr187Q8VEX6 308 aa21.28■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Stfa1P35175 97 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Slc29a3Q99P65 475 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 PipoxQ9D826 390 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Dll4Q9JI71 686 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Phf1Q9Z1B8 559 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Abhd16aQ9Z1Q2 558 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Cfap77A0A087WRI3 283 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Mic13Q8R404 119 aaKnown RBP21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Rbmxl1Q91VM5 388 aaKnown RBP21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Cisd2Q9CQB5 135 aaKnown RBP21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 MtfmtQ9D799 386 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Olfr971Q9EQ96 307 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Dbil5O09035 87 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 ArsaP50428 506 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Dzank1Q8C008 778 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 Lhx6Q9R1R0 363 aa21.27■■□□□ 1
Sh3rf1-201ENSMUST00000034060 NarflQ7TMW6 476 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Ifna16Q810G1 189 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Tmem30aQ8VEK0 364 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Olfr99Q8VFE4 305 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Olfr308Q8VFP2 308 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 HypmQ9CR04 117 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Eif1bQ9CXU9 113 aa21.27■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Nwd2Q6P5U7 1742 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 AI182371A2AS37 356 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Pias3O54714 628 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Hsd3b1P24815 373 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Foxa1P35582 468 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Mex3dQ3UE17 643 aaKnown RBP21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Rph3alQ768S4 302 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 RabepkQ8VCH5 380 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Olfr168Q8VF05 312 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Nat8Q9JIY7 227 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Kcnj15O88932 375 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Slc7a10P63115 530 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Kctd12Q6WVG3 327 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Impad1Q80V26 356 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 FaimQ9WUD8 179 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Hist1h1cP15864 212 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Ypel5P62700 121 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 PkiaP63248 76 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 IdnkQ8R0J8 184 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Scn7aB1AYL1 1681 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Hsbp1l1B2RXB2 72 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Hoxd9P28357 339 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Fam72aQ8BFZ8 149 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Olfr979Q8VH10 311 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Egln2Q91YE2 419 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Golt1aQ9DCQ3 133 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Tp73Q9JJP2 631 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 PtgesQ9JM51 153 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 RictorQ6QI06 1708 aa21.26■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 PhyhO35386 338 aa21.25■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 S100a3P62818 101 aa21.25■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 GcdhQ60759 438 aa21.25■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Olfr1290Q7TQX8 312 aa21.25■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Hdac8Q8VH37 377 aa21.25■□□□□ 0.99
Sh3rf1-201ENSMUST00000034060 Gm21761J3QK00 171 aa21.25■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms